|
| Status |
Public on Jun 01, 2012 |
| Title |
PTC006 |
| Sample type |
RNA |
| |
|
| Source name |
tumor
|
| Organism |
Homo sapiens |
| Characteristics |
clinical description: papillary thyroid carcinoma
|
| Extracted molecule |
total RNA |
| Extraction protocol |
All patients undergoing thyroid surgery by one of the authors (TJF) had thyroid tumor samples collected at the time of surgery. Tumor tissue was dissected by a pathologist and snap frozen in liquid nitrigen and stored at -80C. RNA was extracted, following the manufacturer's protocol, from each sample after homogeneization in TRIzol reagent and RNA clean-up was performed using RNeasy MiniKit.
|
| Label |
NA
|
| Label protocol |
standard Affymetrix protocol
|
| |
|
| Hybridization protocol |
standard Affymetrix protocol
|
| Scan protocol |
standard Affymetrix protocol
|
| Description |
papillary thyroid carcinoma
|
| Data processing |
CEL files were normalized with RMA using the affy Bioconductor package
|
| |
|
| Submission date |
May 16, 2011 |
| Last update date |
Jun 01, 2012 |
| Contact name |
Gil Tomas |
| E-mail(s) |
gil.tomas@ulb.ac.be
|
| Organization name |
ULB
|
| Department |
IRIBHM
|
| Street address |
808 route de Lennik
|
| City |
Brussels |
| ZIP/Postal code |
1070 |
| Country |
Belgium |
| |
|
| Platform ID |
GPL8300 |
| Series (1) |
| GSE29315 |
Compilation of expression profiles distinct thyroid neoplasias |
|
