|
Status |
Public on Jun 01, 2012 |
Title |
HS005 |
Sample type |
RNA |
|
|
Source name |
tumor
|
Organism |
Homo sapiens |
Characteristics |
clinical description: hashimoto thyroiditis
|
Extracted molecule |
total RNA |
Extraction protocol |
All patients undergoing thyroid surgery by one of the authors (TJF) had thyroid tumor samples collected at the time of surgery. Tumor tissue was dissected by a pathologist and snap frozen in liquid nitrigen and stored at -80C. RNA was extracted, following the manufacturer's protocol, from each sample after homogeneization in TRIzol reagent and RNA clean-up was performed using RNeasy MiniKit.
|
Label |
NA
|
Label protocol |
standard Affymetrix protocol
|
|
|
Hybridization protocol |
standard Affymetrix protocol
|
Scan protocol |
standard Affymetrix protocol
|
Description |
hashimoto thyroiditis
|
Data processing |
CEL files were normalized with RMA using the affy Bioconductor package
|
|
|
Submission date |
May 16, 2011 |
Last update date |
Jun 01, 2012 |
Contact name |
Gil Tomas |
E-mail(s) |
gil.tomas@ulb.ac.be
|
Organization name |
ULB
|
Department |
IRIBHM
|
Street address |
808 route de Lennik
|
City |
Brussels |
ZIP/Postal code |
1070 |
Country |
Belgium |
|
|
Platform ID |
GPL8300 |
Series (1) |
GSE29315 |
Compilation of expression profiles distinct thyroid neoplasias |
|