U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC8078747 glutamine--tRNA ligase [ Sorghum bicolor (sorghum) ]

    Gene ID: 8078747, updated on 22-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC8078747
    Gene description
    glutamine--tRNA ligase
    Locus tag
    SORBI_3003G038100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sorghum bicolor
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 3
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 3 NC_012872.2 (3574825..3580884)

    Chromosome 3 - NC_012872.2Genomic Context describing neighboring genes Neighboring gene zinc finger matrin-type protein 2 Neighboring gene phospholipase A1-Igamma1, chloroplastic Neighboring gene pentatricopeptide repeat-containing protein At1g09820 Neighboring gene uncharacterized LOC8084373

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_012872.2 Chromosome 3 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glutamine-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glutaminyl-tRNA aminoacylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    glutamine--tRNA ligase

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Genomic

    1. NC_012872.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

      Range
      3574825..3580884
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002454995.2 → XP_002455040.1  glutamine--tRNA ligase

      See identical proteins and their annotated locations for XP_002455040.1

      UniProtKB/TrEMBL
      A0A921UL64, C5XMK4
      Conserved Domains (1) summary
      PLN02859
      Location:25 → 795
      PLN02859; glutamine-tRNA ligase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases