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    ap4b1 adaptor-related protein complex 4, beta 1 subunit [ Dictyostelium discoideum AX4 ]

    Gene ID: 8624033, updated on 17-May-2024

    Summary

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    Gene symbol
    ap4b1
    Gene description
    adaptor-related protein complex 4, beta 1 subunit
    Primary source
    dictyBase:DDB_G0283319
    Locus tag
    DDB_G0283319
    Gene type
    protein coding
    RNA name
    adaptor-related protein complex 4, beta 1 subunit
    RefSeq status
    PROVISIONAL
    Organism
    Dictyostelium discoideum AX4 (strain: AX4)
    Lineage
    Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
    Old locus tag
    DDBDRAFT_0185456; DDBDRAFT_0234245; DDB_0185456; DDB_0234245
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_007090.3 (525048..527810)

    Chromosome 4 - NC_007090.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene IPT/TIG domain-containing protein Neighboring gene hypothetical protein Neighboring gene F-box-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007090.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by dictyBase

    Function Evidence Code Pubs
    enables clathrin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in vesicle-mediated transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of clathrin adaptor complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of membrane coat IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Names
    adaptor-related protein complex 4, beta 1 subunit
    beta adaptin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007090.3 Reference assembly

      Range
      525048..527810
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_634071.1 → XP_639163.1  adaptor-related protein complex 4, beta 1 subunit [Dictyostelium discoideum AX4]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q54R84
      Conserved Domains (4) summary
      smart01020
      Location:703 → 827
      B2-adapt-app_C; Beta2-adaptin appendage, C-terminal sub-domain
      pfam01602
      Location:39 → 573
      Adaptin_N; Adaptin N terminal region
      pfam12717
      Location:112 → 273
      Cnd1; non-SMC mitotic condensation complex subunit 1
      sd00044
      Location:135 → 163
      HEAT; HEAT repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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