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Sample GSM129457 Query DataSets for GSM129457
Status Public on Aug 23, 2006
Title Patient MKS Normal RNA_rep1 (MKS485)
Sample type RNA
 
Source name Patient MKS Normal RNA_rep1
Organism Homo sapiens
Characteristics PBMC
Biomaterial provider Donor Normal control
Extracted molecule total RNA
Extraction protocol PBMC total RNA is prepared by RNAeasy protocol. RNA quality checked on bioanalyzer.
Label Biotin
Label protocol The Codelink Reagents for IVT kit is used to label 2 µg of total RNA to produce UTP-biotinylated cRNA targets.
 
Hybridization protocol Standard CodeLink procedures
Scan protocol Standard CodeLink procedures
Description Bitynylated cRNA is probe is prepared and hybridization is carried out following the Codelink protocols and reagents
Data processing Normalized intensities analysed by by SAM using two fold cutoff.
 
Submission date Aug 21, 2006
Last update date Aug 22, 2006
Contact name Mandal. K. Singh
E-mail(s) mandal.singh@chp.edu
Phone 412-692-8402
Fax 412-692-6918
Organization name Childrens Hospital of Pittsburgh
Department Transplant
Street address 3460 Fifth Ave
City Pittsburgh
State/province PA
ZIP/Postal code 15206
Country USA
 
Platform ID GPL4191
Series (1)
GSE5574 Gene expression in PBMC from Multiple Sclerosis patients undergoing interferon beta therapy.

Data table header descriptions
ID_REF T00181481
VALUE Normalized Signal intensity

Data table
ID_REF VALUE
1 0.191258096
2 0.35185743
3 1.406725746
4 0.069136982
5 0.247375324
6 2.663125
7 0.231477459
8 0.189656736
9 1.761393678
10 27.89539876
11 0.143078044
12 9.25265793
13 0.469839824
14 0.265458082
15 0.522808333
16 0.248350065
17 0.167159262
18 0.077074158
19 15.69837857
20 1.92907839

Total number of rows: 10458

Table truncated, full table size 170 Kbytes.




Supplementary data files not provided

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