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Report for CCDS65167.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
65167.1 Public Homo sapiens 9 CFAP77 24 110 108 CCDS HistoryNCBI Gene:389799Re-query CCDS DB by CCDS ID:65167.1Re-query CCDS DB by GeneID:389799See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 65167.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393216.3 ENSP00000376909.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393216.3Link to Ensembl Protein Viewer:ENSP00000376909.2Re-query CCDS DB by Nucleotide ID:ENST00000393216Re-query CCDS DB by Protein ID:ENSP00000376909
Original member Current member NCBI NM_001282957.2 NP_001269886.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001282957.2Link to Protein Sequence:NP_001269886.1Re-query CCDS DB by Nucleotide ID:NM_001282957Re-query CCDS DB by Protein ID:NP_001269886Link to BLAST:NP_001269886.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269886.1 284 Q6ZQR2-2 284 100% 0 0

Chromosomal Locations for CCDS 65167.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 132410272 132410466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132498695 132498794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132499372 132499600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132537601 132537706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132542946 132543047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132572388 132572510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (855 nt):
ATGCCAGAGGCCAGGAGCTCCGGCCCGGACCTCACGCGATGGAGGAAGCAGCAGCAGCCTGTGCGCCGCA
CGGTCAGCCAGGTCTGCCCGCCCCCGCGGCGGCCCCTGACCGTGGCGGACATCCGTTCCGGCATGGAGAA
CGAGCGGCTGGGGGTCGTGCGGGACTCCATGTTTCAGAACCCTCTCATCGTCAAGGCTGAACTCGGCAAG
CCCCGGGAAAGAAGCTACAGTCTGCCCGGCATTAATTTTAATTATGGACTCTACATCCGAGGGCTTGACG
GAGGAGTCCCTGAAGCCATCGGACGCTGGAACGTGTTCAAGCAGCAGCCCACCTGCCCCCACGAGCTGAC
CCGGAATTATATCGCAATGAACCGCGGGGCGGTGAAAGCCGGCCTGGTGACTGCCCGGGAGAACTTGCTC
TACCGTCAGCTCAATGACATCCGCATCAGTGACCAGGATGACCGGCGCATGAAGAAAGAGCCGCCCCCTC
TCCCTCCAAACATGACATTTGGGATCCGGGCACGGCCTTCCACACCCTTCTTTGATCTGCTGCAGCACCG
GTACCTGCAGCTGTGGGTACAGGAACAAAAGGCCACCCAGAAAGCCATCAAACTGGAGAAGAAGCAGAAG
GTGGTCCTTGGGAAGCTGTATGAGACCCGGAGCAGTCAGCTGAGGAAGTACAAGCCGCCCGTGAAGCTGG
ACACCCTCTGGCACATGCCTCACTTCCAGAAGGTGGGCCGCCACCTTGATACGTTCCCCACGGAGGCCGA
TCGCCAGAGAGCATTAAAAGCCCACCGGGAAGAGTGTGCCGTGCGCCAGGGGACCCTGCGGATGGGCAAC
TACACCCACCCCTAG

Translation (284 aa):
MPEARSSGPDLTRWRKQQQPVRRTVSQVCPPPRRPLTVADIRSGMENERLGVVRDSMFQNPLIVKAELGK
PRERSYSLPGINFNYGLYIRGLDGGVPEAIGRWNVFKQQPTCPHELTRNYIAMNRGAVKAGLVTARENLL
YRQLNDIRISDQDDRRMKKEPPPLPPNMTFGIRARPSTPFFDLLQHRYLQLWVQEQKATQKAIKLEKKQK
VVLGKLYETRSSQLRKYKPPVKLDTLWHMPHFQKVGRHLDTFPTEADRQRALKAHREECAVRQGTLRMGN
YTHP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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