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Report for CCDS78289.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
78289.1 Public Homo sapiens 7 CRYGN 24 110 108 CCDS HistoryNCBI Gene:155051Re-query CCDS DB by CCDS ID:78289.1Re-query CCDS DB by GeneID:155051See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 78289.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000491928.1 ENSP00000420157.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000491928.1Link to Ensembl Protein Viewer:ENSP00000420157.1Re-query CCDS DB by Nucleotide ID:ENST00000491928Re-query CCDS DB by Protein ID:ENSP00000420157
Original member Current member NCBI NM_001308292.1 NP_001295221.1 Accepted alive Link to Nucleotide Sequence:NM_001308292.1Link to Protein Sequence:NP_001295221.1Re-query CCDS DB by Nucleotide ID:NM_001308292Re-query CCDS DB by Protein ID:NP_001295221Link to BLAST:NP_001295221.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001295221.1 125 Q8WXF5-2 125 100% 0 0

Chromosomal Locations for CCDS 78289.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 151437888 151438244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 151439897 151439917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (378 nt):
ATGGCGCAGCGCTCGGGGAAGATCACTCTCTATGAAGGCAAGCACTTCACAGGGCAGAAGCTGGAGGTCT
TCGGGGACTGTGACAACTTCCAGGACCGGGGCTTTATGAACCGAGTGAACTCCATCCACGTGGAGAGCGG
AGCCTGGGTCTGCTTCAATCACCCCGACTTCCGGGGCCAGCAGTTCATCTTGGAGCACGGCGACTACCCC
GACTTCTTCCGCTGGAACAGCCACAGTGACCACATGGGCTCCTGTCGGCCTGTAGGAATGGTGAGTGGGC
CCGTCCACCGAAGGCTGAGTCTTCCTGCTGGAGGGACCGAGGGTCAGCCCTGGCAGACAGTGGCAAGGAA
TCGGGGAGCGTGGTCCTCCCGGCTTTAA

Translation (125 aa):
MAQRSGKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEHGDYP
DFFRWNSHSDHMGSCRPVGMVSGPVHRRLSLPAGGTEGQPWQTVARNRGAWSSRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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