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Report for CCDS58615.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58615.1 Public Homo sapiens 18 CABLES1 24 110 108 CCDS HistoryNCBI Gene:91768Re-query CCDS DB by CCDS ID:58615.1Re-query CCDS DB by GeneID:91768See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58615.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000400473.6 ENSP00000383321.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400473.6Link to Ensembl Protein Viewer:ENSP00000383321.2Re-query CCDS DB by Nucleotide ID:ENST00000400473Re-query CCDS DB by Protein ID:ENSP00000383321
Original member Current member NCBI NM_001256438.1 NP_001243367.1 Accepted alive Link to Nucleotide Sequence:NM_001256438.1Link to Protein Sequence:NP_001243367.1Re-query CCDS DB by Nucleotide ID:NM_001256438Re-query CCDS DB by Protein ID:NP_001243367Link to BLAST:NP_001243367.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243367.1 306 Q8TDN4-4 306 100% 0 0

Chromosomal Locations for CCDS 58615.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 23194512 23194540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23213977 23214054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23234608 23234704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23235895 23236051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23237142 23237245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23252960 23253066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23253729 23253936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23257227 23257367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (921 nt):
ATGCGGCAACACGATACCAGGAATGGCAGAATAGTCCTTATCAGTGGCAGAAGATCCTTCTGTAGTATAT
TTTCAGTGCTGCCGTATCGCGACAGTACCCAAGTCGGGGACTTGAAGTTGGACGGAGGAAGACAATCAAC
TGGTGCAGTGAGTTTGAAAGAGATCATTGGTCTGGAAGGTGTGGAGCTGGGTGCTGATGGGAAGACTGTT
TCCTATACCCAATTTCTGTTACCCACAAATGCCTTTGGAGCCCGGAGAAATACCATAGACTCCACCTCCT
CTTTCTCCCAGTTCCGTAACCTGAGCCACCGCAGCCTCTCCATAGGCCGGGCAAGCGGCACCCAGGGGAG
CCTCGACACAGGTAGTGACCTGGGAGACTTTATGGACTATGACCCAAATCTCTTGGATGACCCCCAGTGG
CCTTGTGGCAAACACAAACGCGTTCTGATCTTCCCTTCCTACATGACAACAGTGATTGACTACGTGAAGC
CCTCGGATCTCAAGAAGGACATGAACGAGACCTTCAAGGAGAAGTTTCCTCACATTAAGCTGACACTCAG
CAAAATTAGGAGTCTGAAACGAGAGATGCGGAAGCTTGCGCAGGAGGACTGTGGCCTTGAGGAGCCCACG
GTGGCCATGGCCTTCGTCTACTTTGAAAAGCTCGCCCTCAAGGGGAAACTCAACAAACAGAACCGGAAGC
TGTGTGCTGGGGCATGTGTGCTGTTAGCAGCCAAAATTGGAAGTGACCTCAAAAAACACGAAGTCAAGCA
TTTAATTGACAAACTGGAAGAGAAGTTCCGGCTGAACAGGCGAGAACTGATTGCCTTTGAATTCCCGGTG
TTAGTGGCCTTGGAATTCGCCCTCCACTTGCCCGAGCACGAAGTCATGCCCCACTACAGACGGCTGGTCC
AGAGTTCCTAG

Translation (306 aa):
MRQHDTRNGRIVLISGRRSFCSIFSVLPYRDSTQVGDLKLDGGRQSTGAVSLKEIIGLEGVELGADGKTV
SYTQFLLPTNAFGARRNTIDSTSSFSQFRNLSHRSLSIGRASGTQGSLDTGSDLGDFMDYDPNLLDDPQW
PCGKHKRVLIFPSYMTTVIDYVKPSDLKKDMNETFKEKFPHIKLTLSKIRSLKREMRKLAQEDCGLEEPT
VAMAFVYFEKLALKGKLNKQNRKLCAGACVLLAAKIGSDLKKHEVKHLIDKLEEKFRLNRRELIAFEFPV
LVALEFALHLPEHEVMPHYRRLVQSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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