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Sample GSM91255 Query DataSets for GSM91255
Status Public on Jan 10, 2006
Title Female Placebo-Treated Submandibular Gland Sample C
Sample type RNA
 
Source name Balb/c Placebo-Treated Submandibular Gland
Organism Mus musculus
Characteristics Series includes pooled (n = 5 mice per biological replicate) samples from lacrimal, meibomian, and submandibular glands of female palcebo- and testosterone-treated BALB/c mice. All mice were ovariectomized at 8 weeks and allowed to recover from surgery for 10 days prior to hormone implanatation. All experiments were run in triplicate (pooled biological replicates) on CodeLink Mouse Uniset I Microarrays.
Extracted molecule total RNA
Label CodeLink Expression Assay Reagent Kit
 
Description Young adult female BALB/c mice (n = 30), ovariectomized at age 8 weeks, were purchased from Taconic Laboratories (Germantown, NY) and maintained in constant temperature rooms with fixed light/dark periods of 12 hours. Animals were allowed to recover from surgery for 10 days, then anesthetized with ketamine and xylazine, and subcutaneous implants of placebo (n = 15; cholesterol, methylcellulose, lactose)- or testosterone (n = 15; 10 mg)-containing pellets were inserted in the subscapular region. Hormone pellets were obtained from Innovative Research of America (Sarasota, FL) and were designed to maintain male physiologic amounts of testosterone over a two week period. Following two weeks of hormone exposure, the mice were sacrificed in a CO2 chamber, and the lacrimal, meibomian, and submandibular glands were removed and pooled (5 mice per group) into three groups by treatment (n = 6 groups). Glands were immediately frozen and stored in liquid nitrogen until RNA isolation.
Data processing The 10,000 spot intensities on the scanned microarray image were normalized to a median value of 1 and data were exported for analysis.
 
Submission date Jan 08, 2006
Last update date Jan 13, 2006
Contact name Nathaniel Treister
E-mail(s) ntreister@partners.org
Phone 617-912-0298
Organization name Schepens Eye Research Institute
Department
Lab Sullivan Lab
Street address 20 Staniford Street
City Boston
State/province MA
ZIP/Postal code 02114
Country USA
 
Platform ID GPL1310
Series (1)
GSE3995 Female BALB/c Mouse Testosterone-Treated Submandibular/Lacrimal/Meibomian Glands

Data table header descriptions
ID_REF
VALUE Intensity

Data table
ID_REF VALUE
1 1.502965105
2 59.66774459
3 2.820066941
4 0.145585981
5 0.167155785
6 7.709948353
7 5.589942532
8 0.206875275
9 17.22399783
10 2.814266568
11 14.2696746
12 0.566924895
13 16.78023399
14 -1
15 0.70480027
16 2.997097421
17 0.727277512
18 0.196032123
19 0.122415772
20 0.16434962

Total number of rows: 10500

Table truncated, full table size 172 Kbytes.




Supplementary data files not provided

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