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Sample GSM91244 Query DataSets for GSM91244
Status Public on Jan 10, 2006
Title Female Placebo-Treated Lacrimal Gland Sample C
Sample type RNA
 
Source name Balb/c Placebo-Treated Lacrimal Gland
Organism Mus musculus
Characteristics Series includes pooled (n = 5 mice per biological replicate) samples from lacrimal, meibomian, and submandibular glands of female palcebo- and testosterone-treated BALB/c mice. All mice were ovariectomized at 8 weeks and allowed to recover from surgery for 10 days prior to hormone implanatation. All experiments were run in triplicate (pooled biological replicates) on CodeLink Mouse Uniset I Microarrays.
Extracted molecule total RNA
Label CodeLink Expression Assay Reagent Kit
 
Description Young adult female BALB/c mice (n = 30), ovariectomized at age 8 weeks, were purchased from Taconic Laboratories (Germantown, NY) and maintained in constant temperature rooms with fixed light/dark periods of 12 hours. Animals were allowed to recover from surgery for 10 days, then anesthetized with ketamine and xylazine, and subcutaneous implants of placebo (n = 15; cholesterol, methylcellulose, lactose)- or testosterone (n = 15; 10 mg)-containing pellets were inserted in the subscapular region. Hormone pellets were obtained from Innovative Research of America (Sarasota, FL) and were designed to maintain male physiologic amounts of testosterone over a two week period. Following two weeks of hormone exposure, the mice were sacrificed in a CO2 chamber, and the lacrimal, meibomian, and submandibular glands were removed and pooled (5 mice per group) into three groups by treatment (n = 6 groups). Glands were immediately frozen and stored in liquid nitrogen until RNA isolation.
Data processing The 10,000 spot intensities on the scanned microarray image were normalized to a median value of 1 and data were exported for analysis.
 
Submission date Jan 08, 2006
Last update date Jan 09, 2006
Contact name Nathaniel Treister
E-mail(s) ntreister@partners.org
Phone 617-912-0298
Organization name Schepens Eye Research Institute
Department
Lab Sullivan Lab
Street address 20 Staniford Street
City Boston
State/province MA
ZIP/Postal code 02114
Country USA
 
Platform ID GPL1310
Series (1)
GSE3995 Female BALB/c Mouse Testosterone-Treated Submandibular/Lacrimal/Meibomian Glands

Data table header descriptions
ID_REF
VALUE Intensity

Data table
ID_REF VALUE
1 3.338326067
2 152.7041831
3 5.251041189
4 0.284034964
5 0.214035855
6 14.07286416
7 8.675939793
8 0.16655828
9 4.416835064
10 5.020001249
11 10.65881441
12 0.503376573
13 23.84996361
14 -1
15 0.986250789
16 5.83723758
17 1.63139484
18 0.05985522
19 0.28286288
20 0.192586115

Total number of rows: 10500

Table truncated, full table size 172 Kbytes.




Supplementary data files not provided

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