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Sample GSM13186 Query DataSets for GSM13186
Status Public on Dec 04, 2003
Title Duodenum 1C
Sample type RNA
 
Source name Whole segment, duodenum, pool of 10 mice
Organism Mus musculus
Extracted molecule total RNA
 
Description 8 week-old male Hsd:ICR(CD-1) mice were fed ad libitum a standard chow (Harlan Teklad diet 2018S) and housed in groups of five. Animals were then divided into 3 pools (n=10) and sacrificed. The small intestine was extracted and divided into three sections, where the first 2-3 cm after the stomach comprised the duodenum, the middle third the jejunum, and the section before the ileo-ceco-colic junction comprised the ileum. Colon was not divided into proximal and distal sections and was treated as a single intestinal section.
 
Submission date Dec 03, 2003
Last update date May 28, 2005
Contact name Pascale Anderle
E-mail(s) Pascale.Anderle@isrec.unil.ch
Phone +41 692 5859
Organization name ISREC
Department
Street address
City Epalinges
ZIP/Postal code 1066
Country Switzerland
 
Platform ID GPL83
Series (1)
GSE849 Genomic profile of the mouse intestine

Data table header descriptions
ID_REF
VALUE MAS5 data
LN_D1_ADI nat. log transformed MAS5 data
LN_D1_ADI_Norm nat. log transformed, normalized MAS5 data

Data table
ID_REF VALUE LN_D1_ADI LN_D1_ADI_Norm
AFFX-MurIL2_at 51.6 3.944 4.001
AFFX-MurIL10_at 86.6 4.461 4.507
AFFX-MurIL4_at 27.9 3.329 3.384
AFFX-MurFAS_at 441.2 6.089 6.102
AFFX-BioB-5_at 1411.8 7.253 7.177
AFFX-BioB-M_at 1513.5 7.322 7.22
AFFX-BioB-3_at 1675.3 7.424 7.31
AFFX-BioC-5_at 3026.9 8.015 7.878
AFFX-BioC-3_at 2374.8 7.773 7.639
AFFX-BioDn-5_at 3406.3 8.133 8.004
AFFX-BioDn-3_at 12599.9 9.441 9.218
AFFX-CreX-5_at 31336.7 10.353 10.137
AFFX-CreX-3_at 49040.3 10.8 10.615
AFFX-BioB-5_st 453.2 6.116 6.098
AFFX-BioB-M_st 319.6 5.767 5.77
AFFX-BioB-3_st 71.7 4.272 4.312
AFFX-BioC-5_st 82 4.407 4.455
AFFX-BioC-3_st 80.7 4.391 4.45
AFFX-BioDn-5_st 80.8 4.392 4.437
AFFX-BioDn-3_st 355.9 5.875 5.876

Total number of rows: 11934

Table truncated, full table size 324 Kbytes.




Supplementary data files not provided

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