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Series GSE34111 Query DataSets for GSE34111
Status Public on Apr 14, 2012
Title Gene expression in skeletal muscle of cancer patients before and after potentially curative surgery
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The mechanisms underlying muscle wasting in cancer patients remain poorly understood, and consequently there remains an unmet clinical need for new biomarkers and treatment strategies.
 
Overall design Microarrays were used to examine the transcriptome in single biopsies from healthy controls (n=6) and in paired biopsies [pre-resection baseline (weight-loss 7%) and 8 month post-resection follow-up (disease-free /weight-stable for previous 2 months)] from quadriceps muscle of patients with upper gastrointestinal cancer (UGIC) (n=12).
 
Contributor(s) Gallagher IJ, Timmons JA
Citation(s) 22452944
Submission date Dec 02, 2011
Last update date Mar 25, 2019
Contact name Iain Gallagher
E-mail(s) iaingallagher@gmail.com
Phone 00 44 1786 46 6024
Organization name University of Stirling
Department Faculty of Health Sciences and Sport
Street address Room 4B133 Cottrell Building, University of Stirling, Airthrey Road
City Stirling
ZIP/Postal code FK9 4LA
Country United Kingdom
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (30)
GSM842012 Pre-op quadriceps muscle sample Sample20
GSM842013 Pre-op quadriceps muscle sample Sample13
GSM842014 Pre-op quadriceps muscle sample Sample4
Relations
BioProject PRJNA149891

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE34111_RAW.tar 140.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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