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Series GSE10678 Query DataSets for GSE10678
Status Public on Mar 25, 2008
Title Histone deacetylase 4 represses dystrophin-glycoprotein (DGC) complex expression
Organism Mus musculus
Experiment type Expression profiling by array
Summary Dysfunction of the dystrophin-glycoprotein complex (DGC) is a frequent cause of hereditary forms of muscular dystrophy. Although DGC function in maintaining skeletal muscle integrity has been well characterized, little is known about how the DGC complex is coordinately regulated at the transcriptional level. To test this hypothesis, we engineered HDAC4 stably overexpressing and control myotubes in an in vitro model of muscle differentiation. Here we present evidence that HDAC4, a neural activity-responsive histone deacetylase, is a critical transcriptional regulator of the DGC complex. We show that HDAC4 can repress multiple components of the DGC complex, including dystrophin and sarcoglycan family members in both cultured myotubes. To confirm this finding, the protein levels of core DGC complex members including dystrophin, sarcoglycan complex members, and additional dystrophin-associated proteins were evaluated in differentiated myotubes by western analysis.
Keywords: genetic modification and cell type comparison of muscle cells
 
Overall design C2C12 mouse myotubes were infected with either a HDAC4 expressing or control (Neo) retroviruses. After stable selection, myotubes were differentiated at 90% confluency in 2% horse serum (Hyclone) for 4 days. At this time point, RNA was extracted and the two types of cells compared in a microarray analysis.
 
Contributor(s) Cohen TJ, Barrientos T, Garvey SM, Hartman ZC, Cox GA, Bedlack RS, Yao T
Citation(s) 18780762
Submission date Feb 29, 2008
Last update date Mar 18, 2013
Contact name Zachary Conrad Hartman
E-mail(s) zch@duke.edu
Phone 919-684-9197
Organization name Duke University
Department Surgery
Lab Lyerly Lab
Street address Research Drive MSRB rm 414
City Durham
State/province NC
ZIP/Postal code 27710
Country USA
 
Platforms (1)
GPL3222 Duke University Murine Operon v.3.0 spotted Array
Samples (8)
GSM267279 C2C12 Neo cell-1 RNA
GSM267280 C2C12 Neo cell-2 RNA
GSM267281 C2C12 Neo cell-3 RNA
Relations
BioProject PRJNA107661

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE10678_RAW.tar 22.9 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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