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Status
Public on Dec 31, 2011
Title
Affymetrix GeneChip Rat Genome U34A Array [CDF: MBNI Version 13 (UniGene 183)]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Rattus norvegicus
Manufacturer
Affymetrix standard protocol
Manufacture protocol
see manufacturer's website
Description
UMMBNI Rat 4819 v1.0 Affymetrix, with custom cdf file from University of Michigan microarray core This is identical to GPL85 but a custom CDF environment was used to extract data.
Submission date
May 26, 2011
Last update date
Dec 31, 2011
Contact name
Sarah Megan Clinton
E-mail(s)
clintons@uab.edu
Organization name
University of Alabama-Birmigham
Department
Psychiatry and Behavioral Neurobiology
Lab
Clinton Lab
Street address
1720 7th Avenue South, SC 745
City
Birmingham
State/province
Alabama
ZIP/Postal code
35294
Country
USA
Samples (71)
GSM731605 , GSM731606 , GSM731607 , GSM731608 , GSM731609 , GSM731610
GSM731611 ,
GSM731612 ,
GSM731613 ,
GSM731614 ,
GSM731615 ,
GSM731616 ,
GSM731617 ,
GSM731618 ,
GSM731619 ,
GSM731620 ,
GSM731621 ,
GSM731622 ,
GSM731623 ,
GSM731624 ,
GSM731625 ,
GSM731626 ,
GSM731627 ,
GSM731628 ,
GSM731629 ,
GSM731630 ,
GSM731631 ,
GSM731632 ,
GSM731633 ,
GSM731634 ,
GSM731635 ,
GSM731636 ,
GSM731637 ,
GSM731638 ,
GSM731639 ,
GSM731640 ,
GSM731641 ,
GSM731642 ,
GSM731643 ,
GSM731644 ,
GSM731645 ,
GSM731646 ,
GSM731647 ,
GSM731648 ,
GSM731649 ,
GSM731650 ,
GSM731651 ,
GSM731652 ,
GSM731653 ,
GSM731654 ,
GSM731655 ,
GSM731656 ,
GSM731657 ,
GSM731658 ,
GSM731659 ,
GSM731660 ,
GSM731661 ,
GSM731662 ,
GSM731663 ,
GSM731664 ,
GSM731665 ,
GSM731666 ,
GSM731667 ,
GSM731668 ,
GSM731669 ,
GSM731670 ,
GSM731671 ,
GSM731672 ,
GSM731673 ,
GSM731674 ,
GSM731675
Series (1)
GSE29552
Developmental underpinnings of differences in rodent novelty-seeking and emotional reactivity
Relations
Alternative to
GPL85 (Alternative CDF [official])
Data table header descriptions
ID
Probe set IDs are based on Affymetric probe IDs for controls, and based on Unigene clusters for all remaining clusters of probes
UNIGENE_ID
UniGene identifier
Description
SPOT_ID
Data table
ID
UNIGENE_ID
Description
SPOT_ID
AFFX-BioB-3_at
CONTROL
AFFX-BioB-3_st
CONTROL
AFFX-BioB-5_at
CONTROL
AFFX-BioB-5_st
CONTROL
AFFX-BioB-M_at
CONTROL
AFFX-BioB-M_st
CONTROL
AFFX-BioC-3_at
CONTROL
AFFX-BioC-3_st
CONTROL
AFFX-BioC-5_at
CONTROL
AFFX-BioC-5_st
CONTROL
AFFX-BioDn-3_at
CONTROL
AFFX-BioDn-3_st
CONTROL
AFFX-BioDn-5_at
CONTROL
AFFX-BioDn-5_st
CONTROL
AFFX-CreX-3_at
CONTROL
AFFX-CreX-3_st
CONTROL
AFFX-CreX-5_at
CONTROL
AFFX-CreX-5_st
CONTROL
AFFX-DapX-3_at
CONTROL
AFFX-DapX-5_at
CONTROL
Total number of rows: 4819 Table truncated, full table size 298 Kbytes .
Supplementary file
Size
Download
File type/resource
GPL13653_Rn34A_Rn_UG.cdf.gz
2.2 Mb
(ftp) (http)
CDF
GPL13653_Rn34A_Rn_UG_annotation.txt.gz
62.2 Kb
(ftp) (http)
TXT