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Platform GPL1292 Query DataSets for GPL1292
Status Public on Jun 18, 2004
Title Hitachisoft AceGene Mouse Oligo Chip 30k 1 Chip Version
Technology type spotted oligonucleotide
Distribution commercial
Organism Mus musculus
Manufacturer Hitachisoft
Manufacture protocol see manufacturer's web site
 
Description Hitachisoft AceGene Mouse Oligo Chip 30K 1 Chip Version
 
Web link http://hitachisoft.jp/dnasis/acegene/
Submission date Jun 16, 2004
Last update date May 29, 2012
Organization Hitachi Software Engineering Co., Ltd.
E-mail(s) dnachip@hitachisoft.jp
Phone +81-45-500-5111
Street address
City 1-1-43,Suehiro-cho,Tsurumi-ku,Yokohama
ZIP/Postal code 230-0045
Country Japan
 
Samples (12) GSM136678, GSM136679, GSM136680, GSM136681, GSM1539895, GSM1539896 
Series (5)
GSE5852 Livers of mice fed an atherogenic diet for 6 or 24 weeks
GSE63069 Gene expression profiles in in vitro cardiogenesis.
GSE63071 Gene expression profiles of the Cited4 overexpressed and downregulated cells.

Data table header descriptions
ID
Description Description of the probe
CDS_ID Aceesion number of corresponding public database (In the case of GenBank and RefSeq, the position of the CDS within the record is shown after an underscore)
GB_ACC GenBank accession number
Entrez Gene ID Entrez Gene ID
Symbol Symbol of the gene derived from Entrez Gene ID
GeneName Gene Name derived from Entrez Gene ID
IPI ID IPI ID derived from Entrez Gene ID
MGI ID MGI ID derived from Entrez Gene ID
GO Molecular Function GO Molecular Function derived from Entrez Gene ID
GO Biological Process GO Biological Process derived from Entrez Gene ID
GO Cellular Component GO Cellular Component derived from Entrez Gene ID
GI
SPOT_ID spot identifier

Data table
ID Description CDS_ID GB_ACC Entrez Gene ID Symbol GeneName IPI ID MGI ID GO Molecular Function GO Biological Process GO Cellular Component GI SPOT_ID
AGmmA010101 hepatocyte nuclear factor 4, gamma; hnf4g NM_013920_1 NM_013920 30942 Hnf4g hepatocyte nuclear factor 4, gamma IPI00322956.5, IPI00831486.1 MGI:1353604 zinc ion binding, metal ion binding, DNA binding, sequence-specific DNA binding, transcription factor activity, steroid binding, tRNA-pseudouridine synthase activity, receptor activity, ligand-dependent nuclear receptor activity, steroid hormone receptor activity, transcriptional activator activity regulation of transcription, DNA-dependent, transcription from RNA polymerase II promoter, transcription transcription factor complex, nucleus 30942
AGmmA010102 signal transducer and activator of transcription 4; stat4 NM_011487_1 NM_011487 20849 Stat4 signal transducer and activator of transcription 4 IPI00114970.1, IPI00649102.2 MGI:103062 calcium ion binding, DNA binding, transcription factor activity, protein binding, signal transducer activity regulation of transcription, DNA-dependent, signal transduction, cytokine and chemokine mediated signaling pathway, intracellular signaling cascade, cell proliferation, transcription nucleus 20849
AGmmA010103 g-protein coupled receptor AB016602_1 AB016602 171469 Gpr37l1 G protein-coupled receptor 37-like 1 IPI00468685.2 MGI:1928503 signal transducer activity, receptor activity, G-protein coupled receptor activity, rhodopsin-like receptor activity signal transduction, G-protein coupled receptor protein signaling pathway integral to membrane, membrane 171469
AGmmA010104 5-hydroxytryptamine (serotonin) receptor 5b; htr5b NM_010483_1 NM_010483 15564 Htr5b 5-hydroxytryptamine (serotonin) receptor 5B IPI00133476.1 MGI:96284 signal transducer activity, receptor activity, G-protein coupled receptor activity, rhodopsin-like receptor activity, serotonin receptor activity signal transduction, G-protein coupled receptor protein signaling pathway integral to membrane, membrane 15564
AGmmA010105 leucine-rich repeat-containing f-box protein fbl3a AF176521_1 AF176521 50789 Fbxl3 F-box and leucine-rich repeat protein 3 IPI00135622.3, IPI00377647.1 MGI:1354702 molecular_function biological_process, ubiquitin cycle cellular_component, nucleus 50789
AGmmA010106 riken cdna 4833439l19; c81457 NM_133797_1 NM_133797 97820 4833439L19Rik RIKEN cDNA 4833439L19 gene IPI00119921.4, IPI00224275.1, IPI00461124.1 MGI:1921162 97820
AGmmA010107 unknown (protein for mgc:7386) BC002189_1 BC002189 620316 ENSMUSG00000074670 predicted gene, ENSMUSG00000074670 MGI:3642300 620316
AGmmA010108 unclassifiable AK015788_1 AK015788 75125 4930513O06Rik RIKEN cDNA 4930513O06 gene IPI00137820.2 MGI:1922375 75125
AGmmA010109 related to cg4768 protein AK007485_1 AK007485 69053 1810013L24Rik RIKEN cDNA 1810013L24 gene IPI00111835.5, IPI00654273.1, IPI00760081.1 MGI:1916303 69053
AGmmA010110 procollagen, type xvii, alpha 1; col17a1 NM_007732_1 NM_007732 12821 Col17a1 procollagen, type XVII, alpha 1 IPI00284644.4, IPI00399843.4 MGI:88450 structural molecule activity, extracellular matrix structural constituent conferring tensile strength cell adhesion, phosphate transport hemidesmosome, cytoplasm, integral to membrane, membrane, collagen, proteinaceous extracellular matrix 12821
AGmmA010111 ribosomal protein s12; rps12 NM_011295_1 NM_011295 20042 Rps12 ribosomal protein S12 IPI00225634.6, IPI00554850.2 MGI:98105 structural constituent of ribosome ribosome biogenesis and assembly, translation cytosolic ribosome (sensu Eukaryota), ribosome, ribonucleoprotein complex, intracellular 20042
AGmmA010112 domain of unknown function duf36 containing protein AK002682_1 AK002682 76894 Mett5d1 methyltransferase 5 domain containing 1 IPI00187413.3, IPI00749676.1 MGI:1924144 transferase activity, methyltransferase activity 76894
AGmmA010113 unknown (protein for mgc:25957) BC014769_1 BC014769 73166 Tm7sf2 transmembrane 7 superfamily member 2 IPI00110579.1, IPI00651845.1, IPI00751362.2 MGI:1920416 oxidoreductase activity, delta14-sterol reductase activity cholesterol biosynthetic process, sterol biosynthetic process endoplasmic reticulum, integral to plasma membrane, integral to membrane, membrane 73166
AGmmA010114 protease, serine, 11 (igf binding); prss11 NM_019564_1 NM_019564 56213 Htra1 HtrA serine peptidase 1 IPI00128040.1 MGI:1929076 protein binding, growth factor binding, insulin-like growth factor binding, hydrolase activity, peptidase activity, chymotrypsin activity, serine-type endopeptidase activity negative regulation of BMP signaling pathway, negative regulation of transforming growth factor beta receptor signaling pathway, regulation of cell growth, proteolysis extracellular region, extracellular space 56213
AGmmA010115 hypothetical protein AK003299_1 AK003299 68544 2310036O22Rik RIKEN cDNA 2310036O22 gene IPI00133958.2 MGI:1922833 68544
AGmmA010116 complement receptor; crry M34173_2 M34173 12946 Crry complement receptor related protein IPI00138061.1, IPI00169975.3, IPI00338738.4, IPI00459605.1, IPI00762196.1 MGI:88513 receptor activity complement activation, classical pathway, negative regulation of complement activation, regulation of complement activation, multicellular organismal development, innate immune response, immune response, pregnancy integral to membrane, membrane 12946
AGmmA010117 ubiquitin c; ubc NM_019639_1 NM_019639 22190 Ubc ubiquitin C IPI00139518.3, IPI00470152.2, IPI00649896.1, IPI00750889.1, IPI00751553.1, IPI00754026.1, IPI00754653.1, IPI00755916.2, IPI00756500.1, IPI00762564.1, IPI00762833.1 MGI:98889 protein modification process nucleus 22190
AGmmA010118 glycoprotein 1b, alpha polypeptide; gp1ba NM_010326_1 NM_010326 14723 Gp1ba glycoprotein 1b, alpha polypeptide IPI00136164.2 MGI:1333744 protein binding cell adhesion, fibrinolysis, cell morphogenesis, blood coagulation, hemostasis membrane fraction, integral to plasma membrane, integral to membrane, plasma membrane, membrane 14723
AGmmA010119 lecithin-retinol acyltransferase; lrat NM_023624_1 NM_023624 79235 Lrat lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase) IPI00119943.1 MGI:1891259 transferase activity, acyltransferase activity, O-acyltransferase activity, phosphatidylcholine-retinol O-acyltransferase activity lecithin metabolic process, vitamin A metabolic process, visual perception, response to stimulus endoplasmic reticulum, integral to membrane, membrane 79235
AGmmA010120 homolog to cdna flj10540 fis, clone nt2rp2001245 AK004655_1 AK004655 74107 Cep55 centrosomal protein 55 IPI00466518.2, IPI00473407.1, IPI00754344.2 MGI:1921357 cell cycle, mitosis, cell division 74107

Total number of rows: 29568

Table truncated, full table size 10070 Kbytes.






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