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    ECU10_0620 uncharacterized protein [ Encephalitozoon cuniculi GB-M1 ]

    Gene ID: 859826, updated on 17-May-2024

    Summary

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    Gene symbol
    ECU10_0620
    Gene description
    uncharacterized protein
    Primary source
    MicrosporidiaDB:ECU10_0620
    Locus tag
    ECU10_0620
    See related
    VEuPathDB:ECU10_0620
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Encephalitozoon cuniculi GB-M1 (isolate: GB-M1)
    Lineage
    Eukaryota; Fungi; Fungi incertae sedis; Microsporidia; Unikaryonidae; Encephalitozoon
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    Genomic context

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    See ECU10_0620 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    1
    Sequence:
    Chromosome: X; NC_003236.1 (74232..77051, complement)

    Chromosome X - NC_003236.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene T-complex protein 1 subunit eta Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003236.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of transcriptional signals in Encephalitozoon cuniculi widespread among Microsporidia phylum: support for accurate structural genome annotation. Peyretaillade E, et al. BMC Genomics, 2009 Dec 15. PMID 20003517, Free PMC Article
    2. Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi. Katinka MD, et al. Nature, 2001 Nov 22. PMID 11719806

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_586177.1
    • 10_0620, NONSENSE-MEDIATED mRNA DECAY PROTEIN 5, NMD5_YEAST, gene found by Glimmer

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003236.1 Reference assembly

      Range
      74232..77051 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001042010.1 → NP_586177.1  uncharacterized protein ECU10_0620 [Encephalitozoon cuniculi GB-M1]

      See identical proteins and their annotated locations for NP_586177.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q8SR54
      UniProtKB/TrEMBL
      M1KA91
      Conserved Domains (2) summary
      smart00913
      Location:23 → 86
      IBN_N; Importin-beta N-terminal domain
      COG5656
      Location:1 → 932
      SXM1; Importin, protein involved in nuclear import [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SR54.1

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