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    BPTFP1 bromodomain PHD finger transcription factor pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 109286551, updated on 10-Oct-2023

    Summary

    Official Symbol
    BPTFP1provided by HGNC
    Official Full Name
    bromodomain PHD finger transcription factor pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:52869
    See related
    Ensembl:ENSG00000263647 AllianceGenome:HGNC:52869
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    Location:
    17q24.1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (64761914..64762712, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (65631666..65632464, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (62758032..62758830, complement)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene Neighboring gene U5 small nuclear ribonucleoprotein 200 kDa helicase-like Neighboring gene MICOS10 pseudogene 2 Neighboring gene karyopherin subunit alpha 2 pseudogene 3 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:62755217-62755429 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:62773916-62774585 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:62774586-62775254 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8849 Neighboring gene Rho GTPase activating protein 27 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8850 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:62781097-62781856 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr17:62782294-62783493 Neighboring gene microRNA 6080 Neighboring gene pleckstrin homology and RUN domain containing M1 pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:62794173-62794673 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:62817908-62818408 Neighboring gene microRNA 4315-2

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_052568.2 

      Range
      101..899
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      64761914..64762712 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      65631666..65632464 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)