6MZM


Conserved Protein Domain Family
TAF4

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pfam05236: TAF4 
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Transcription initiation factor TFIID component TAF4 family
This region of similarity is found in Transcription initiation factor TFIID component TAF4.
Statistics
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PSSM-Id: 461598
Aligned: 68 rows
Threshold Bit Score: 149.728
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6MZM_D        774 INDVASMAGVNLSEESARIL-------AT--NSELVGTLTRSCKDE-----TFLLQAPLQRRILEIGKKHGIT---ELHP 836 
EEQ40494      268 LNDALAAAGVDIQREEELLSiqn--nrTA--INLHQQQFANRQRQTfgpmgSFLHPYHVALFMNRTARENGVAqnfMVDP 343 
A5DAX7        190 LNDALAAAGVDIGREEELLQqqqynraPR--INVQQPSYLQSRPARqiqrtPFLNSYHLGTFMQRVARENGVLqsfMSDN 267  Meyerozyma gu...
EGV64901      150 LNDALAAAGVDIQREEELLMqq---qlSR--VPQQPQFNQQRVAVS-----QFLNPYHVNTYMQKSARENGVLqnfLQDP 219 
XP_001385652   20 LNDAIAAAGVDIQREEELLTiqq-trtTD--VSRDLRQFLRSSKPP-----AFLNPYHVASFMNRVARENGVQqnfLQDG 91  
CCE44832       98 LNDAIAAAGVNIHEEEELLLqqqslrkNE--ATNEKNVLSRAPKVS-----PFLNPYHLAAFLGKVAKTHQINqnfLEDG 170 
Q59U67         87 LNDAIAAAGVDIQQEEEILLqqqlnrkSAegMASNLKSVIRSSKSP-----PFLHNYHLAAFIDKVAKQNGIQqnfLMDG 161  Candida albic...
EER34823      145 LNDAIAAAGVDIQQEEEILLqqqlnrkSTdgMTSNLKNVIKSSKPP-----SFLNNYHLAAFMDKVAKENGIQqnfLMDG 219 
Q6BKB1        241 LNDALAAAGVDIQHEEELLMqqhlnrsSR--FPSAQQPPRQRFAQT-----SLFSPYHVAAFMQRVARENGVMqnfYQDA 313  Debaryomyces ...
CCE80465      203 LNDALVAAGVDLQQEEELLMqqqmnrsNR--YNLSQTGLYRQPQREdv-gsLLLNPYHLAVYMQRVSKENGIQqnfFQDP 279 
6MZM_D        837 DVVSYVSHATQQRLQNLVEKISETAQQKNF-SYKDDDR-----------YE-----QASDVRAQLKFFEQLDQIEKQRKD 899 
EEQ40494      344 EMLDFMSAACKEWLSSIVMKTIALARHRRR-GIPAFnnkngnsgg---kpksippsQRSEVSKELRNLALRQKEQEERRV 419 
A5DAX7        268 ELLELMSASCEQWISHIATKTVLLSRHRRR-GIPALknkkl----------aanqiPRSEVSKELRNLALKQKELEEQRV 336  Meyerozyma gu...
EGV64901      220 EVLEIMSASCERWISDIVAKTIVMARHRQN-SAPIGksk--------------ttsGKSDMYSELRGLAKKHRELEEQRV 284 
XP_001385652   92 DLLELMSASCEMWLSSILGKTVLLSRHRRR-GIPQPtnakngkk----assnansaPRSELSKELRNLAVRQKELEERRI 166 
CCE44832      171 DMLNLVSGACETWIAQIASKAITISRHRRRgGVLTTskkng----------tisssQRSAVSRELRNIAVKQKELEEKRV 240 
Q59U67        162 EMLELISAACETWLSNLATKTIILSRHRRR-GIPVINK-----------KSgsssvPRSEISKELRSLALKQKEMEEKRV 229  Candida albic...
EER34823      220 EMLELVSAACETWLSRLATKTMMLSRHRRR-GIPKIgkrsg-----------sssvPRSEISKELRNLAIKQKELEEKRV 287 
Q6BKB1        314 ELLELMSTSCENWLSNIITKTIILSRHRRR-GIPTItntkqnkktasssasmsnpaSRSELSKELRNLAAKQKEMEERRV 392  Debaryomyces ...
CCE80465      280 ELLELMSSSCEDWLSHIITKTIILSRHRRR-GMfgnaakn---------kkppvntQRSELSRELRNIALKQKELEEKRV 349 
6MZM_D        900 E---QerEILMRAAKSRSRQEDPEQLRLKQK--AkemqqqelaqmrQRDANLTALAAIG-PRKKRKv-------DCPGPG 966 
EEQ40494      420 Akr--laLGLEKSDD----VAPETGNKVGAEetL------------HRAANATAAMMTMnPSRKKYswm---tsGASDGG 478 
A5DAX7        337 Srr--ilLGLENKDA------NSESNKVGAEetL------------HRAANETAAMMTS--NKKKYswm---ssGAGNGD 391  Meyerozyma gu...
EGV64901      285 Err--iaLGLEKSDD-----NGKYENKAGSEetL------------HRAANATAAMMTSnPGRKKYswm---tsGAGGPN 342 
XP_001385652  167 Skr--imLGLEKNGA-DPDGDQNGDSKAGAEetL------------HRAANATAAMMTMkTGVKKYswm---tsTSSAGA 228 
CCE44832      241 Skr--iaLGLEKSAN-DSNDGENGDSKAGADetL------------HRAANATAAMMTV--GKKKYswm---nsSANGGG 300 
Q59U67        230 NkrvM--LGLEKSTKDASKNDENGESKAGAEetL------------HRAANATAAMMTMnPGRKKYswm---tsSATAGG 292  Candida albic...
EER34823      288 Skr--vmLGLEKSPNDPSNTGENGDSKAGAEetL------------HRAANATAAMMTMnLGKKKYswmtssngSGGGGG 353 
Q6BKB1        393 Skr--maLGLEKDGT-DPGNGDPANGKAGAEetL------------HRAANATAAMMTMnPGRKKYswm---taNAGSGG 454  Debaryomyces ...
CCE80465      350 Akr--vaLGIEKDPS-DSSWNESGSGKADAEetL------------HRAANATAAMMAN-PGRKKYswm---nsGSNASN 410 
6MZM_D        967 SGAEGSGPGSVVPGSSgvgtp----------rqftrQRITRVNLRDLIFCLENERETShSLLLYKA 1022
EEQ40494      479 DAGKASPAKDSSskqsslistr----gdnglryreiRTGNMVTTKDLLGVLEDERMGTsKALIKAM 540 
A5DAX7        392 DSKAMEREKdkqshllalr-------gdnglrfrdiRTGDSVTMKDLLAALEDERMGVnKAIMKGY 450  Meyerozyma guilliermondii A...
EGV64901      343 GGSAGVSEKDSNskrshllssr----gdngirlnntRITQAVTMKDLLAAIEDERMNVqNALVKGY 404 
XP_001385652  229 DTAKAGADTEKgkqsallsvr-----gdnglrfreiRSGNTITMKDILGAIEGERMGTqRAIIKGY 289 
CCE44832      301 VGSDVDGKGGSSSNKgkqspiisar-gdsglryrevRAGNSIVLKDLLGAIENEKRGTqEAVVKGY 365 
Q59U67        293 GSDFGKSSGGSSKDSGkhqspiisvrgdnglrfreiRSGNSIIMKDLLGAIEDEKMGTrNAVIKGY 358  Candida albicans SC5314
EER34823      354 GADSGKSGNGASKDGrkespiisir-gdnglrfreiRSGNSVVMKDLLEAIEDEKRGTrNAIVKGY 418 
Q6BKB1        455 GDDSKVASEKDGKskqssiiaar---gdnglrfreiRSGNSVTMKDLLGALEDERMGTeKAVLKGY 517  Debaryomyces hansenii CBS767
CCE80465      411 TDESSADKSGarqstlisvr------gdnglryreiRTGNTVTVKDLLSALEDERMGSeKALLKGY 470 
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