2KC2,3IVF,2KMA


Conserved Protein Domain Family
FERM_F1_TLN1

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cd17173: FERM_F1_TLN1 
Click on image for an interactive view with Cn3D
FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in Talin-1 (TLN1)
TLN1 is a cytoskeletal protein that plays a pivotal role in regulating the activity of the integrin family of cell adhesion proteins by coupling them to F-actin. It functions as a focal adhesion protein involved in the attachment of the bacterium. It binds to multiple adhesion molecules, including integrins, vinculin, focal adhesion kinase (FAK), and actin. TLN1 also plays an essential role in integrin activation. TLN1 interacts with the hepatitis B virus (HBV) accessory protein X (HBx), which induces the degradation of TLN1. It also acts as an adaptor protein that regulates leukocyte function-associated antigen-1 (LFA-1) affinity. In addition, TLN1 is required for myoblast fusion, sarcomere assembly and the maintenance of myotendinous junctions. TLN1 consists of an N-terminal head and a C-terminal rod. The talin head harbors a FERM (Band 4.1, ezrin, radixin, moesin) domain made up of F1, F2 and F3 domains, as well as an N-terminal region that precedes the FERM domain and has been referred to as the F0 domain. Both F0 and F1 domains have similar ubiquitin-like folds. This family corresponds to the F1 domain.
Statistics
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PSSM-Id: 340693
Aligned: 9 rows
Threshold Bit Score: 151.022
Created: 2-Nov-2016
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
key conserved
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1: key conserved lysines, 2 residue positions
Conserved feature residue pattern:[KR] [KR]Click to see conserved feature residue pattern help
Evidence:
  • Comment:2 (K6/R, K33/R Ub numbering) of the 7 lysines involved in chain linkage in ubiquitin (K6, K11, K27, K29, K33, K48, or K63, Ub numbering) are conserved in this family; may have roles other than chain linkage

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              #                          #                                               
2KC2_A         12 RPLKIRMLDGTVKTIMVDDskTVTDMLMTICARIGItNHDEYSLVRELmeekkdegtgtlrkdktllrdekkmeklkqkl 91   house mouse
P54939         86 RPLKIRMLDGTVKTVMVDDskTVTDMLTTICARIGItNYDEYSLVREImeekkeevtgtlkkdktllrdekkmeklkqkl 165  chicken
OCT56929      158 RPLKIRMLDGTVKTVMVDDskTMSDLLMTICARIGItNYDEYSLVREImeekkeevtgtlkrdktllrddkkmeklkqkl 237  African clawe...
XP_014349194   86 RPLKIRMLDGTVKTVMVDDskIVTDMLMTICARIGItNYDEYSLVRDIieekkdetvgtlkkdktllrdnkkmeklkqkl 165  coelacanth
NP_001009560   86 RPLKIRMLDGTVKTVMVDDskIVSDMLMTICARIGItNYDEYSLVRDVgeekkeettgtlkrdktllrddkkmeklkqkl 165  zebrafish
XP_007895362   86 RPLKIRMLDGSIKTVMVDDskIVSDMLMTICARIGItNHDEYSLVHEIveekkeemtgtlkkdktllrddkkmeklkqkl 165  elephant shark
Q9Y490         86 RPLKIRMLDGTVKTIMVDDskTVTDMLMTICARIGItNHDEYSLVRELmeekkeeitgtlrkdktllrdekkmeklkqkl 165  human
3IVF_A         86 RPLKIRMLDGTVKTIMVDDskTVTDMLMTICARIGItNHDEYSLVRELmee----------------------------- 136  house mouse
2KMA_A         92 RPLKIRMLDGTVKTIMVDDskTVTDMLMTICARIGItNHDEYSLVRELme------------------------------ 141  house mouse
Feature 1                                         
2KC2_A         92 htDDELNWLDHGRTLREQGVEEHETLLLRRKF 123  house mouse
P54939        166 htDDELNWLDHGRTLREQGIDDNETLLLRRKF 197  chicken
OCT56929      238 htDDELNWLDPGRTLREQGVDENETLLLRRKF 269  African clawed frog
XP_014349194  166 htDDDLNWLDHGRTLREQGVDETETLLLRRKF 197  coelacanth
NP_001009560  166 htDDELNWLDHGRTLREQGVEESEMLLLRRKF 197  zebrafish
XP_007895362  166 htDDDLNWLDHGRTLREQGVDENETLLLRRKF 197  elephant shark
Q9Y490        166 htDDELNWLDHGRTLREQGVEEHETLLLRRKF 197  human
3IVF_A        137 kkDDELNWLDHGRTLREQGVEEHETLLLRRKF 168  house mouse
2KMA_A        142 ekKDELNWLDHGRTLREQGVEEHETLLLRRKF 173  house mouse

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