Conserved Protein Domain Family
RING-H2_Rapsyn

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cd16478: RING-H2_Rapsyn (this model, PSSM-Id:319392 is obsolete and has been replaced by 438141)
RING finger, H2 subclass, found in 43 kDa receptor-associated protein of the synapse (Rapsyn) and similar proteins
Rapsyn, also known as acetylcholine receptor-associated 43 kDa protein or RING finger protein 205 (RNF205), is a 43 kDa postsynaptic protein that plays an essential role in the clustering and maintenance of acetylcholine receptor (AChR) in the postsynaptic membrane of the motor endplate (EP). AChRs enable the transport of rapsyn from the Golgi complex to the plasma membrane through a molecule-specific interaction. Rapsyn also mediates subsynaptic anchoring of protein kinase A (PKA) type I in close proximity to the postsynaptic membrane, which is essential for synapse maintenance. Its mutations in humans cause endplate acetylcholine-receptor deficiency and myasthenic syndrome. Rapsyn contains an N-terminal myristoylation signal required for membrane association, seven tetratricopeptide repeats (TPRs) that subserve rapsyn self-association, a coiled-coil domain responsible for the binding of determinants within the long cytoplasmic loop of each AChR subunit, a C3H2C3-type RING-H2 finger that binds to the cytoplasmic domain of beta-dystroglycan and to S-NRAP and links rapsyn to the subsynaptic cytoskeleton, and a serine phosphorylation site.
Statistics
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PSSM-Id: 319392
Aligned: 12 rows
Threshold Bit Score: 78.6274
Created: 2-May-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteRING-H2 finger
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment:Based on the structural evidence that Oryza sativa El5 (1IYM) binds two Zn2+ ions through its RING-H2 finger.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #  #               # #  #  #               #  #  
Q13702       360 ELYCGLCGEsIGEKNSRLQALPCSHIFHLRCLQnn-------gtRSCPNCRR 404 human
O42393       360 ELYCGMCGEsIGEKNNQLQALPCSHFFHLKCLQtn-------gtRGCPNCRR 404 chicken
NP_001005667 360 ELYCGMCGEsIGEKNCQLQALPCSHVFHLRCLQtn-------gtRGCPNCRR 404 western clawed frog
NP_840090    360 ELYCGMCGEsIGEKNQQLQALPCSHIFHLKCLQtn-------gtKGCPKCHR 404 zebrafish
NP_001071936 407 ELFCGICAEpMAEKNEQLEALPCSHFFHLKCVSnnda----lemRMCPSCQK 454 Ciona intestinalis
XP_002587259 361 ELYCGACGDtYGEKPDRIEALPCSHIFHSRCVEttl-----qktTGCPDCRR 407 Florida lancelet
NP_651928    452 GLNCGACGElLGLRPENLEALPCAHILHARCAYeilrrreknapRSCPACNK 503 fruit fly
XP_005987008 314 ELYCGMCGEsIGDKNHQLQALPCSHLFHLKCLQtn-------gtRGCPNCRR 358 coelacanth
XP_007883141 358 ELYCGMCGEsIGDKNAPLQALPCSHIFHLKCLQkn-------gtNGCPNCKR 402 elephant shark
XP_003729649 361 ELYCGVCHEvMGNRENSLNSLTCFHIFHSRCVEnst-----fktRGCPNCKK 407 purple sea urchin
XP_006814328 118 ALSCGVCNEvISEKPESLESLQCSHLFHASCLEeyta----gdsRGCPDCRR 165 Saccoglossus kowalevskii
Q09485       371 QLFCNFCGQrYGLKDESLQALRCSHIFHEKCLHtyll---qrtdQTCPKCRC 419 Caenorhabditis elegans

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