Conserved Protein Domain Family
LOTUS_1_TDRD7

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cd09986: LOTUS_1_TDRD7 
The first LOTUS domain on Tudor-containing protein 7 (TDRD7)
The first LOTUS domain on Tudor-containing protein 7 (TDRD7): TDRD7 contains three N-terminal LOTUS domains and three Tudor domain repeats at the C-terminus. It belongs to the evolutionary conserved Tudor domain-containing protein (TDRD) family involved in germ cell development. In mice, TDRD7 together with TDRD1/MTR-1, TDRD5 and TDRD6 forms a ribonucleoprotein complex in the intermitochondrial cements (IMCs) and the chromatoid bodies (CBs) involving in RNA processing for spermatogenesis. TDRD7 is functionally essential for the differentiation of germ cells. The exact molecular function of LOTUS domain on TDRD7 remains to be characterized. Its occurrence in proteins associated with RNA metabolism suggests that it might be involved in RNA binding function. The presence of several basic residues and RNA fold recognition motifs support this hypothesis. The RNA binding function might be the first step of regulating mRNA translation or localization.
Statistics
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PSSM-Id: 193600
Aligned: 4 rows
Threshold Bit Score: 164.208
Created: 9-Mar-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ABR24798        4 VELVKKMLRAVLQSskhgVAMARLQGDYRALTGEMIPfrkfGHDTLESFLrSIPGVVRLersitGEVMCFAgvceetAHI 83   zebrafish
NP_055105       4 GDLVSKMLRAVLQShkngVALPRLQGEYRSLTGDWIPfkqlGFPTLEAYLrSVPAVVRIetsrsGEITCYAmactetARI 83   human
CAF96462        4 VEPVKKMLRAVLQAnkggISLPRLQSEYKELTGEQIPhkqmGYHHLDALLaTMPSLVHMernrsGETMCFLsltnerAAV 83   spotted green...
XP_002663007    4 EELVKKMVRAVLQSsksgLSLSDLQVEYKDLTGELIPykqlGYVTLDALLhSMPSIVKLdkgqsGEVMCHAttgnemAHI 83   zebrafish
ABR24798       84 AQLVARQK 91   zebrafish
NP_055105      84 AQLVARQR 91   human
CAF96462       84 AKVVARQR 91   spotted green pufferfish
XP_002663007   84 TKLAARQR 91   zebrafish
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