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Report for CCDS33036.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33036.1 Public Homo sapiens 19 PRR19 24 110 108 CCDS HistoryNCBI Gene:284338Re-query CCDS DB by CCDS ID:33036.1Re-query CCDS DB by GeneID:284338See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33036.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341747.8 ENSP00000342709.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000341747.8Link to Ensembl Protein Viewer:ENSP00000342709.3Re-query CCDS DB by Nucleotide ID:ENST00000341747Re-query CCDS DB by Protein ID:ENSP00000342709
Original member Current member EBI ENST00000499536.2 ENSP00000445247.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000499536.2Link to Ensembl Protein Viewer:ENSP00000445247.1Re-query CCDS DB by Nucleotide ID:ENST00000499536Re-query CCDS DB by Protein ID:ENSP00000445247
Original member Current member EBI ENST00000595750.2 ENSP00000469298.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000595750.2Link to Ensembl Protein Viewer:ENSP00000469298.2Re-query CCDS DB by Nucleotide ID:ENST00000595750Re-query CCDS DB by Protein ID:ENSP00000469298
Original member Current member NCBI NM_199285.3 NP_954979.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_199285.3Link to Protein Sequence:NP_954979.2Re-query CCDS DB by Nucleotide ID:NM_199285Re-query CCDS DB by Protein ID:NP_954979Link to BLAST:NP_954979.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_954979.2 356 A6NJB7-1 356 100% 0 0

Chromosomal Locations for CCDS 33036.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 42309585 42310185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42310271 42310740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1071 nt):
ATGGATACCCAGGGACCAGTCTCCCAGCCTTTTCAGCAGCCTGAGAAACCTGGTCGTGTCCGTCGTCGGA
AG
ACTAGGCGGGAACGTAACAAGGCCCTGGTGGGCAGCCGCCGGCCATTAGCCCACCACGATCCTCCTGT
G
GCCATTCGGGATCCACCTGTGGTCCCTACTGCCTCCAAGCTCGTGGTCATAACCCAGGGCCGGCTGAGC
CGG
GAGCACCGGGGTCTCTTCAACCACGAGGTGAAATCCCTAGATGTTGCAAGGCTGCTTAGCAGTGGGA
CC
CTGGTGCCAGGCAGCCCCACACTCCCCGCCAAGCCCTCCCCAAGCCCAGGCAGGGCCCAGGAACCAGC
C
CCACGGTCCAGGGACAAAGAGAACCAGGTGCCTGGAGGTTCGGGCCCAGGCCCACCCAGTTCCCCAGAG
TTG
TCTGGCGTGGGGCAGCTGCTGGCAGAGCTGCAGTGTCAGCTGAGTTTGCCACAGGCCTTCCCCCGGA
GG
AACCTGATTCAGGATGCCAGGGATGCCATCGTGCACACCTTGCAGGCCTGTCATGGTTGTGTGCCTGA
C
CTTGCCCTGGTGCTTCGGGGCTGCCAGCCACCCTTGCCAGGGGCCAAGCCTGGGGTCTCTGAGAGAAAG
ATG
ACACCCTTCTGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGAGAGGCAAAGGAAGCAACAAGGGA
CA
AAGGAGTTCACCTTCCCCATGCCCTACACCTCCAGCATGCCCACTGCGCACAGGGGGAGTCTGGCACC
G
CCAAGAGGTCCCTGGCCACCATACTTTCCCTCACTGTCTTCGCCATCTGGAACAGCCTGGGGTCCCCCA
ACA
GCGTTTGACTTGTTAAAAAGCATCTGGCTGGTAGCCACGCCACCCCCTCCTCGGCCCTGGGGGGTTG
GC
CTCCCTCAGCCCCTGCCTCAGCCTTCATCACCCCTGTTGCCCCGAACCTCTGTCCTGGACTGGAGCCC
C
AGCCCCCCTTCCCCACTGCCCAGCCTCTCCTGGGTAGTAGCCCAGAGCAGTCCGGAAGCCTGGTCTTTT
CCA
CCCATGAGACTGTACTGA


Translation (356 aa):
MDTQGPVSQPFQQPEKPGRVRRRKTRRERNKALVGSRRPLAHHDPPVAIRDPPVVPTASKLVVITQGRLS
R
EHRGLFNHEVKSLDVARLLSSGTLVPGSPTLPAKPSPSPGRAQEPAPRSRDKENQVPGGSGPGPPSSPE
L
SGVGQLLAELQCQLSLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPLP
GAKPGVSERK
M
TPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPWPPYFPSLSSPSGTAWGPP
T
AFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWSPSPPSPLPSLSWVVAQSSPEAWSF
P
PMRLY




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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