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Report for CCDS6467.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6467.1 Public Homo sapiens 9 RANBP6 24 110 108 CCDS HistoryNCBI Gene:26953Re-query CCDS DB by CCDS ID:6467.1Re-query CCDS DB by GeneID:26953See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6467.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000259569.6 ENSP00000259569.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000259569.6Link to Ensembl Protein Viewer:ENSP00000259569.5Re-query CCDS DB by Nucleotide ID:ENST00000259569Re-query CCDS DB by Protein ID:ENSP00000259569
Original member Current member NCBI NM_012416.4 NP_036548.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012416.4Link to Protein Sequence:NP_036548.1Re-query CCDS DB by Nucleotide ID:NM_012416Re-query CCDS DB by Protein ID:NP_036548Link to BLAST:NP_036548.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036548.1 1105 O60518 1105 100% 0 0

Chromosomal Locations for CCDS 6467.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 6012290 6015607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3318 nt):
ATGGCGGCAACCGCGTCTGCAGGGGTGCCGGCGACCGTGTCAGAAAAGCAAGAGTTTTACCAGCTTCTGA
AGAACCTGATCAATCCAAGCTGTATGGTGCGGAGGCAAGCAGAGGAAATCTATGAAAATATCCCAGGTCT
GTGTAAGACTACCTTCCTCTTAGATGCCGTCAGAAATAGAAGAGCAGGTTATGAGGTGAGACAAATGGCT
GCCGCACTGCTACGACGGCTTTTGTCCTCTGGGTTTGAGGAGGTTTATCCAAATCTGCCTGCTGATGTTC
AGAGAGATGTCAAGATTGAACTGATTCTGGCTGTTAAGTTAGAAACACATGCTAGCATGAGGAAAAAACT
TTGTGATATTTTTGCAGTGCTGGCCAGGAATTTGATAGATGAGGATGGCACTAACCACTGGCCGGAAGGT
CTGAAGTTTCTTATTGATTCAATCTACTCCAAAAATGTGGTTCTATGGGAAGTTGCACTTCACGTTTTCT
GGCACTTTCCTGGGATTTTTGGGACCCAAGAGCGGCATGATTTGGATATCATCAAACGGTTGTTGGACCA
GTGTATTCAAGATCAAGAACATCCAGCAATCAGGACATTATCCGCTAGAGCTGCAGCTGCATTTGTACTT
GCTAATGAGAATAATATTGCTCTTTTCAAAGACTTTGCAGACTTGCTTCCTGGAATCTTACAGGCTGTGA
ATGACTCATGCTACCAGGATGATGATTCAGTGCTAGAATCCCTTGTTGAGATTGCAGATACCGTACCTAA
GTACTTGGGTCCTTATTTAGAAGATACTCTACAGTTGAGTTTGAAGTTATGTGGAGACTCTAGGCTTAGT
AATCTGCAGCGCCAGCTGGCCCTCGAAGTTATAGTGACCTTGTCTGAAACTGCCACTCCGATGTTGAAAA
AACATACAAATATTATTGCACAGGCAGTTCCTCATATATTAGCAATGATGGTTGATCTACAAGATGATGA
GGACTGGGTAAATGCTGATGAAATGGAAGAAGATGATTTTGACAGCAATGCAGTTGCTGCGGAGAGTGCA
CTAGACAGACTGGCTTGTGGGCTTGGTGGAAAAGTTGTTTTACCAATGACCAAGGAGCATATCATGCAGA
TGCTTCAGAGCCCTGACTGGAAGTATCGACATGCTGGATTAATGGCCTTATCTGCCATTGGAGAAGGATG
CCATCAACAAATGGAATCAATTCTAGATGAAACAGTTAACTCCGTTTTGCTTTTTCTTCAGGATCCTCAT
CCAAGGGTGAGGGCTGCAGCCTGTACTACACTTGGACAGATGGCTACAGATTTTGCACCTAATTTCCAAA
AGAAATTTCATGAAACAGTGATTGCAGCTCTGTTACGTACCATGGAAAATCAAGGTAATCAGCGTGTGCA
ATCACATGCAGCTTCTGCTCTTATTATTTTTATTGAAGACTGCCCTAAATCATTGCTAGTTCTATATGTG
GATAGTATGGTGAAAAATCTACATTCCGTCTTGGTGATTAAACTTCAAGAGTTGATTCGGAATGGAACTA
AGTTGGCTTTGGAACAACTTGTGACAACCATTGCATCAGTTGCAGATACAATAGAAGAAAAATTTGTCCC
ATATTATGATATATTCATGCCCTCACTAAAGCACATTGTTGAGCTTGCTGTTCAGAAGGAACTCAAGCTT
CTGAGAGGAAAAACTATCGAGTGCATTAGCCATATTGGTCTTGCTGTTGGGAAGGAAAAATTTATGCAAG
ATGCATCAAATGTGATGCAGCTGTTGTTGAAGACACAATCAGACTTAAATAATATGGAAGATGATGACCC
TCAGACCTCTTACATGGTTTCAGCATGGGCTAGAATGTGTAAAATTCTTGGAAAAGATTTTCAACAGTAC
CTTCCACTGGTTATCGAGCCTCTTATTAAGACTGCTTCAGCTAAACCTGATGTTGCTCTCTTAGACACAC
AGGATGTGGAAAATATGAGTGACGATGATGGCTGGCAATTTGTAAATCTTGGAGACCAGCAGAGTTTTGG
AATTAAAACTTCAGGACTTGAAGCAAAAGCAACTGCTTGCCAAATGTTGGTTTACTATGCTAAGGAGTTA
AGGGAAGGGTTTGTGGAATATACAGAACAAGTTGTGAAGCTGATGGTTCCTTTACTGAAATTTTATTTCC
ATGACAATGTTCGAGTGGCAGCAGCAGAGTCCATGCCTTTTCTCCTGGAATGTGCAAGAATTCGTGGCCC
AGAGTATCTTGCACAGATGTGGCAATTCATATGTGACCCCTTAATCAAGGCTATTGGTACTGAACCAGAT
ACAGATGTGCTCTCAGAAATAATGAATTCTTTTGCAAAGTCCATTGAAGTTATGGGAGATGGTTGCCTTA
ATGATGAACACTTGGAAGAACTGGGAGGAATACTGAAAGCAAAACTTGAAGGGCACTTTAAAAACCAAGA
ATTGAGACAGGTGAAAAGACAGGAAGAAAACTATGATCAACAGGTTGAGATGTCTCTGCAAGATGAGGAT
GAATGTGATGTTTATATTCTGACCAAAGTATCAGATATTTTGCACTCATTATTTAGTACTTATAAGGAAA
AGATTTTACCATGGTTTGAACAACTACTTCCATTAATTGTAAATCTAATTTGTTCAAGTAGGCCATGGCC
AGACAGACAGTGGGGATTGTGCATATTTGATGACATCATAGAGCACTGCAGTCCAACTTCATTTAAATAT
GTAGAATATTTTCGGTGGCCAATGCTACTAAATATGCGAGATAACAACCCTGAAGTCAGGCAAGCTGCTG
CTTATGGCCTGGGTGTCATGGCACAGTTTGGTGGAGATGATTATCGTTCTTTATGTTCAGAAGCTGTTCC
ACTTCTGGTAAAAGTTATTAAGTGTGCAAATTCCAAAACCAAAAAAAATGTCATTGCTACAGAGAACTGT
ATCTCAGCAATAGGGAAGATTTTGAAGTTTAAGCCTAACTGTGTAAATGTAGATGAAGTTCTTCCACACT
GGTTATCATGGCTTCCACTGCATGAAGATAAAGAGGAAGCTATTCAGACTTTGAGTTTTCTCTGTGACCT
AATTGAAAGTAACCACCCAGTTGTAATTGGTCCAAATAATTCCAATCTTCCCAAAATAATCAGTATAATT
GCAGAAGGAAAAATTAATGAGACTATTAACTATGAGGATCCTTGTGCCAAACGCCTAGCTAATGTCGTGC
GTCAGGTACAGACTTCTGAAGATTTATGGTTGGAATGTGTATCACAACTTGATGATGAACAGCAGGAAGC
CTTACAGGAGTTGCTAAATTTTGCTTGA

Translation (1105 aa):
MAATASAGVPATVSEKQEFYQLLKNLINPSCMVRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMA
AALLRRLLSSGFEEVYPNLPADVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEG
LKFLIDSIYSKNVVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQEHPAIRTLSARAAAAFVL
ANENNIALFKDFADLLPGILQAVNDSCYQDDDSVLESLVEIADTVPKYLGPYLEDTLQLSLKLCGDSRLS
NLQRQLALEVIVTLSETATPMLKKHTNIIAQAVPHILAMMVDLQDDEDWVNADEMEEDDFDSNAVAAESA
LDRLACGLGGKVVLPMTKEHIMQMLQSPDWKYRHAGLMALSAIGEGCHQQMESILDETVNSVLLFLQDPH
PRVRAAACTTLGQMATDFAPNFQKKFHETVIAALLRTMENQGNQRVQSHAASALIIFIEDCPKSLLVLYV
DSMVKNLHSVLVIKLQELIRNGTKLALEQLVTTIASVADTIEEKFVPYYDIFMPSLKHIVELAVQKELKL
LRGKTIECISHIGLAVGKEKFMQDASNVMQLLLKTQSDLNNMEDDDPQTSYMVSAWARMCKILGKDFQQY
LPLVIEPLIKTASAKPDVALLDTQDVENMSDDDGWQFVNLGDQQSFGIKTSGLEAKATACQMLVYYAKEL
REGFVEYTEQVVKLMVPLLKFYFHDNVRVAAAESMPFLLECARIRGPEYLAQMWQFICDPLIKAIGTEPD
TDVLSEIMNSFAKSIEVMGDGCLNDEHLEELGGILKAKLEGHFKNQELRQVKRQEENYDQQVEMSLQDED
ECDVYILTKVSDILHSLFSTYKEKILPWFEQLLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKY
VEYFRWPMLLNMRDNNPEVRQAAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENC
ISAIGKILKFKPNCVNVDEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIESNHPVVIGPNNSNLPKIISII
AEGKINETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLNFA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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