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Report for CCDS54830.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54830.1 Public Homo sapiens 5 EXOC3 24 110 108 CCDS HistoryNCBI Gene:11336Re-query CCDS DB by CCDS ID:54830.1Re-query CCDS DB by GeneID:11336See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54830.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000315013.9 ENSP00000323377.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000315013.9Link to Ensembl Protein Viewer:ENSP00000323377.5Re-query CCDS DB by Nucleotide ID:ENST00000315013Re-query CCDS DB by Protein ID:ENSP00000323377
Original member Current member EBI ENST00000512944.6 ENSP00000425587.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000512944.6Link to Ensembl Protein Viewer:ENSP00000425587.1Re-query CCDS DB by Nucleotide ID:ENST00000512944Re-query CCDS DB by Protein ID:ENSP00000425587
Original member Current member NCBI NM_007277.5 NP_009208.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007277.5Link to Protein Sequence:NP_009208.2Re-query CCDS DB by Nucleotide ID:NM_007277Re-query CCDS DB by Protein ID:NP_009208Link to BLAST:NP_009208.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009208.2 745 O60645 745 100% 0 0

Chromosomal Locations for CCDS 54830.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 446206 446349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 447533 447752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 453370 454051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 456889 457006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 457900 458025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 459359 459459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 461960 462070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 462157 462307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 464290 464412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 465111 465272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 465718 465845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 466727 466898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2238 nt):
ATGAAGGAGACAGACCGGGAGGCCGTTGCGACAGCAGTGCAAAGGGTTGCTGGGATGCTCCAGCGCCCGG
AC
CAGCTGGACAAGGTGGAGCAGTATCGCAGGAGAGAAGCGCGGAAGAAGGCCTCCGTGGAGGCCAGATT
G
AAGGCCGCCATCCAGTCACAGTTGGACGGGGTGCGCACAGGCCTCAGCCAGCTCCACAACGCCCTGAAT
GAC
GTCAAAGACATCCAGCAGTCGCTGGCAGACGTCAGCAAGGACTGGAGGCAGAGCATCAACACCATTG
AG
AGCCTCAAGGACGTCAAAGACGCCGTGGTGCAGCACAGCCAGCTCGCCGCAGCCGTGGAGAACCTCAA
G
AACATCTTCTCAGTGCCTGAGATTGTGAGGGAGACCCAGGACCTAATTGAACAAGGGGCACTCCTGCAA
GCC
CACCGGAAGCTGATGGACCTGGAGTGCTCCCGGGACGGGCTGATGTACGAGCAGTACCGCATGGACA
GT
GGGAACACGCGTGACATGACCCTCATCCATGGCTACTTTGGCAGCACGCAGGGGCTCTCTGATGAGCT
G
GCTAAGCAGCTGTGGATGGTGCTGCAGAGGTCACTGGTCACTGTCCGCCGTGACCCCACCTTGCTGGTC
TCA
GTTGTCAGGATCATTGAAAGGGAAGAGAAAATTGACAGGCGCATACTTGACCGGAAAAAGCAAACTG
GC
TTTGTTCCTCCTGGGAGGCCCAAGAATTGGAAGGAGAAAATGTTCACCATCTTGGAGAGGACTGTGAC
C
ACCAGAATTGAGGGCACACAGGCAGATACCAGAGAGTCTGACAAGATGTGGCTTGTCCGCCACCTGGAA
ATT
ATAAGGAAGTACGTCCTGGATGACCTCATTGTCGCCAAAAACCTGATGGTTCAGTGCTTTCCTCCCC
AC
TATGAGATCTTTAAGAACCTCCTGAACATGTACCACCAAGCCCTGAGCACGCGGATGCAGGACCTCGC
A
TCGGAAGACCTGGAAGCCAATGAGATCGTGAGCCTCTTGACGTGGGTCTTAAACACCTACACAAGTACT
GAG
ATGATGAGGAACGTGGAGCTGGCCCCGGAAGTGGATGTCGGCACCCTGGAGCCATTGCTTTCTCCAC
AC
GTGGTCTCTGAGCTGCTTGACACGTACATGTCCACGCTCACTTCAAACATCATCGCCTGGCTGCGGAA
A
GCGCTGGAGACAGACAAGAAAGACTGGGTCAAAGAGACAGAGCCAGAAGCCGACCAGGACGGGTACTAC
CAG
ACCACACTCCCTGCCATTGTCTTCCAGATGTTTGAACAGAATCTTCAAGTTGCTGCTCAGATAAGTG
AA
GATTTGAAAACAAAGGTACTAGTTTTATGTCTTCAGCAGATGAATTCTTTCCTAAGCAGATATAAAGA
T
GAAGCGCAGCTGTATAAAGAAGAGCACCTGAGGAATCGGCAGCACCCTCACTGCTACGTTCAGTACATG
ATC
GCCATCATCAACAACTGCCAGACCTTCAAGGAATCCATAGTCAGTTTAAAAAGAAAGTATTTAAAGA
AT
GAAGTGGAAGAGGGTGTGTCTCCGAGCCAGCCCAGCATGGACGGGATTTTAGACGCCATCGCGAAGGA
G
GGCTGCAGCGGTTTGCTGGAGGAGGTCTTCCTGGACCTGGAGCAACATCTGAATGAATTGATGACGAAG
AAG
TGGCTATTAGGGTCAAACGCTGTAGACATTATCTGTGTCACCGTGGAAGACTATTTCAACGATTTTG
CC
AAAATTAAAAAGCCGTATAAGAAGAGGATGACGGCCGAGGCGCACCGGCGCGTGGTGGTGGAGTACCT
G
CGGGCGGTCATGCAGAAGCGCATTTCCTTCCGGAGCCCGGAGGAGCGCAAGGAGGGTGCCGAGAAGATG
GTT
AGGGAGGCAGAGCAGCTGCGCTTCCTGTTCCGGAAGCTGGCGTCCGGTTTCGGGGAAGACGTGGACG
GA
TACTGCGACACCATCGTGGCTGTGGCCGAAGTGATCAAGCTGACAGACCCTTCTCTGCTCTACCTGGA
G
GTCTCCACTCTGGTCAGCAAGTATCCAGACATCAGGGATGACCACATCGGTGCGCTGCTGGCTGTGCGT
GGG
GACGCCAGCCGTGACATGAAGCAGACCATCATGGAGACCCTGGAGCAGGGCCCAGCACAGGCCAGCC
CC
AGCTACGTGCCCCTCTTCAAGGACATTGTGGTGCCCAGCCTGAACGTGGCCAAGCTGCTCAAGTAG


Translation (745 aa):
MKETDREAVATAVQRVAGMLQRPDQLDKVEQYRRREARKKASVEARLKAAIQSQLDGVRTGLSQLHNALN
D
VKDIQQSLADVSKDWRQSINTIESLKDVKDAVVQHSQLAAAVENLKNIFS
VPEIVRETQDLIEQGALLQ
A
HRKLMDLECSRDGLMYEQYRMDSGNTRDMTLIHGYFGSTQGLSDELAKQLWMVLQRSLVTVRRDPTLLV
S
VVRIIEREEKIDRRILDRKKQTGFVPPGRPKNWKEKMFTILERTVTTRIEGTQADTRESDKMWLVRHLE
I
IRKYVLDDLIVAKNLMVQCFPPHYEIFKNLLNMYHQALSTRMQDLASEDLEANEIVSLLTWVLNTYT
ST
E
MMRNVELAPEVDVGTLEPLLSPHVVSELLDTYMSTLT
SNIIAWLRKALETDKKDWVKETEPEADQDGYY
Q
TTLPAIVFQ
MFEQNLQVAAQISEDLKTKVLVLCLQQMNSFLSRYKDEAQLYKEEHLRNRQHPHCYVQYM
I
AIINNCQTF
KESIVSLKRKYLKNEVEEGVSPSQPSMDGILDAIAKEGCSGLLEEVFLDLEQHLNELMTK
K
WLLGSNAVDIICVTVEDYFNDFAKIKKPYKK
RMTAEAHRRVVVEYLRAVMQKRISFRSPEERKEGAEKM
V
REAEQLRFLFRKLAS
GFGEDVDGYCDTIVAVAEVIKLTDPSLLYLEVSTLVSKYPDIRDDHIGALLAVR
G
DASRDMKQTIMETLEQGPAQASPSYVPLFKDIVVPSLNVAKLLK




Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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