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Report for CCDS13131.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13131.1 Public Homo sapiens 20 MGME1 24 110 108 CCDS HistoryNCBI Gene:92667Re-query CCDS DB by CCDS ID:13131.1Re-query CCDS DB by GeneID:92667See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13131.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377710.10 ENSP00000366939.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377710.10Link to Ensembl Protein Viewer:ENSP00000366939.5Re-query CCDS DB by Nucleotide ID:ENST00000377710Re-query CCDS DB by Protein ID:ENSP00000366939
Original member Current member NCBI NM_052865.4 NP_443097.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052865.4Link to Protein Sequence:NP_443097.1Re-query CCDS DB by Nucleotide ID:NM_052865Re-query CCDS DB by Protein ID:NP_443097Link to BLAST:NP_443097.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443097.1 344 Q9BQP7 344 100% 0 0

Chromosomal Locations for CCDS 13131.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 17969860 17970370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 17975684 17975903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 17988166 17988298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 17989939 17990109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1035 nt):
ATGAAGATGAAGTTATTTCAGACCATTTGCAGGCAGCTCAGGAGTTCAAAGTTTTCTGTGGAATCAGCTG
CCCTTGTGGCTTTCTCTACTTCCTCTTACTCATGTGGCCGGAAGAAAAAAGTGAACCCATATGAAGAAGT
GGACCAAGAAAAATACTCTAATTTAGTTCAGTCTGTCTTGTCATCCAGAGGCGTCGCCCAGACCCCGGGA
TCGGTGGAGGAAGATGCTTTGCTCTGTGGACCCGTGAGCAAGCATAAGCTGCCAAACCAAGGTGAGGACA
GACGAGTGCCACAAAACTGGTTTCCTATCTTCAATCCAGAGAGAAGTGATAAACCAAATGCAAGTGATCC
TTCAGTTCCTTTGAAAATCCCCTTGCAAAGGAATGTGATACCAAGTGTGACCCGAGTCCTTCAGCAGACC
ATGACAAAACAACAGGTTTTCTTGTTGGAGAGGTGGAAACAGCGGATGATTCTGGAACTGGGAGAAGATG
GCTTTAAAGAATACACTTCAAACGTCTTTTTACAAGGGAAACGGTTCCACGAAGCCTTGGAAAGCATACT
TTCACCCCAGGAAACCTTAAAAGAGAGAGATGAAAATCTCCTCAAGTCTGGTTACATTGAAAGTGTCCAG
CATATTCTGAAAGATGTCAGTGGAGTGCGAGCTCTTGAAAGTGCTGTTCAACATGAAACCTTAAACTATA
TAGGTCTGCTGGACTGTGTGGCTGAGTATCAGGGCAAGCTCTGTGTGATTGATTGGAAGACATCAGAGAA
ACCAAAGCCTTTTATTCAAAGTACATTTGACAACCCACTGCAAGTTGTGGCATACATGGGTGCCATGAAC
CATGATACCAACTACAGCTTTCAGGTTCAATGTGGCTTAATTGTGGTGGCCTACAAAGATGGATCACCTG
CCCACCCACATTTCATGGATGCAGAGCTCTGTTCCCAGTACTGGACCAAGTGGCTTCTTCGACTAGAAGA
ATATACGGAAAAGAAAAAGAACCAGAATATTCAGAAACCAGAATATTCAGAATAG

Translation (344 aa):
MKMKLFQTICRQLRSSKFSVESAALVAFSTSSYSCGRKKKVNPYEEVDQEKYSNLVQSVLSSRGVAQTPG
SVEEDALLCGPVSKHKLPNQGEDRRVPQNWFPIFNPERSDKPNASDPSVPLKIPLQRNVIPSVTRVLQQT
MTKQQVFLLERWKQRMILELGEDGFKEYTSNVFLQGKRFHEALESILSPQETLKERDENLLKSGYIESVQ
HILKDVSGVRALESAVQHETLNYIGLLDCVAEYQGKLCVIDWKTSEKPKPFIQSTFDNPLQVVAYMGAMN
HDTNYSFQVQCGLIVVAYKDGSPAHPHFMDAELCSQYWTKWLLRLEEYTEKKKNQNIQKPEYSE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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