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Report for CCDS45444.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45444.1 Public Homo sapiens 16 RBBP6 24 110 108 CCDS HistoryNCBI Gene:5930Re-query CCDS DB by CCDS ID:45444.1Re-query CCDS DB by GeneID:5930See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45444.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000452655.6 ENSP00000390537.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000452655.6Link to Ensembl Protein Viewer:ENSP00000390537.2Re-query CCDS DB by Nucleotide ID:ENST00000452655Re-query CCDS DB by Protein ID:ENSP00000390537
Original member Current member NCBI NM_032626.6 NP_116015.2 Accepted alive Link to Nucleotide Sequence:NM_032626.6Link to Protein Sequence:NP_116015.2Re-query CCDS DB by Nucleotide ID:NM_032626Re-query CCDS DB by Protein ID:NP_116015Link to BLAST:NP_116015.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116015.2 118 Q7Z6E9-3 118 100% 0 0

Chromosomal Locations for CCDS 45444.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 24540627 24540792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24546163 24546262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 24548945 24549035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (357 nt):
ATGTCCTGTGTGCATTATAAATTTTCCTCTAAACTCAACTATGATACCGTCACCTTTGATGGGCTCCACA
TCTCCCTCTGCGACTTAAAGAAGCAGATTATGGGGAGAGAGAAGCTGAAAGCTGCCGACTGCGACCTGCA
GATCACCAATGCGCAGACGAAAGAAGAATATACTGATGATAATGCTCTGATTCCTAAGAATTCTTCTGTA
ATTGTTAGAAGAATTCCTATTGGAGGTGTTAAATCTACAAGCAAGACATATGTTATAAGTCGAACTGAAC
CAGCGATGGCAACTACAAAAGCAGTATGTAAAAACACAATCTCACACTTTTTCTACACATTGCTTTTACC
TTTATAA

Translation (118 aa):
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDDNALIPKNSSV
IVRRIPIGGVKSTSKTYVISRTEPAMATTKAVCKNTISHFFYTLLLPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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