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Report for CCDS40220.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
40220.1 |
Public |
Mus musculus |
8 |
Col4a2 |
23 |
108 |
98 |
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Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 40220.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000033899.13 |
ENSMUSP00000033899.7 |
Accepted |
alive |
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NCBI |
NM_009932.4 |
NP_034062.3 |
Updated |
not alive |
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NCBI |
NM_009932.5 |
NP_034062.3 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_034062.3 |
1707 |
P08122 |
1707 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 40220.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (5124 nt): ATGGACCGAGTGCGGTTCAAAGCGTCTGGCCCTCCCCTGCGAGGGTGGCTGCTGCTAGCAACTGTGACAG TGGGACTCCTGGCTCAGAGCGTCTTGGGGGGTGTGAAGAAGTTGGATGTGCCCTGCGGAGGGAGAGACTG CAGTGGGGGTTGCCAGTGCTACCCGGAGAAAGGAGCAAGGGGTCAGCCAGGGGCAGTGGGCCCCCAGGGG TACAATGGCCCCCCAGGGTTGCAAGGATTCCCAGGACTACAGGGCCGCAAAGGAGACAAGGGCGAACGGG GAGTTCCTGGACCAACTGGACCAAAAGGAGATGTGGGAGCGAGAGGCGTCTCTGGATTCCCCGGTGCAGA TGGAATTCCTGGGCATCCAGGGCAAGGCGGACCCCGAGGAAGGCCAGGCTACGATGGTTGCAACGGAACC AGGGGAGACGCGGGTCCACAGGGGCCCTCTGGATCTGGGGGCTTCCCTGGCCTCCCTGGGCCCCAAGGAC CCAAGGGGCAGAAAGGCGAGCCTTACGCACTCTCTAAAGAAGACCGTGACAAATACCGGGGTGAACCTGG AGAGCCTGGCCTGGTTGGCTACCAGGGACCTCCTGGCCGCCCAGGGCCCATAGGACAGATGGGTCCCATG GGAGCACCTGGAAGACCGGGACCACCGGGACCCCCTGGACCCAAGGGACAACCAGGCAACCGAGGGCTCG GTTTTTACGGACAGAAGGGTGAAAAGGGTGACATAGGACAGCCAGGACCCAACGGGATCCCATCTGACAT CACACTTGTTGGGCCCACAACATCAACGATCCACCCGGATCTGTACAAGGGTGAAAAAGGAGACGAAGGA GAGCAAGGGATACCCGGCGTAATCTCAAAAGGCGAGGAAGGCATCATGGGGTTCCCAGGAATACGGGGTT TTCCTGGCCTTGATGGAGAAAAAGGAGTCGTAGGACAGAAAGGAAGCAGAGGCCTGGATGGTTTCCAAGG CCCCAGTGGACCTCGAGGACCCAAGGGAGAACGGGGGGAACAAGGACCCCCAGGACCCTCTGTCTACTCG CCCCATCCATCCCTGGCAAAAGGTGCCCGAGGTGACCCAGGATTCCAAGGTGCTCATGGGGAGCCAGGAA GCCGAGGCGAACCGGGAGAGCCTGGAACCGCGGGTCCTCCAGGCCCATCCGTCGGAGATGAAGATTCAAT GAGAGGCCTTCCAGGGGAGATGGGACCCAAAGGCTTCTCAGGAGAACCAGGGTCCCCTGCACGCTATCTT GGCCCACCAGGAGCAGATGGAAGACCAGGTCCCCAAGGAGTCCCTGGACCTGCAGGCCCACCTGGACCAG ATGGCTTCCTGTTTGGCCTGAAAGGATCAGAAGGGAGAGTGGGCTACCCGGGACCTTCAGGTTTCCCAGG AACACGAGGGCAGAAAGGATGGAAAGGTGAAGCTGGAGACTGCCAATGTGGCCAGGTCATCGGGGGTCTT CCGGGACTGCCAGGACCCAAAGGTTTTCCCGGTGTCAATGGGGAGCTCGGAAAGAAAGGCGACCAAGGAG ACCCAGGCCTGCACGGTATCCCTGGGTTCCCAGGATTCAAGGGAGCCCCGGGCGTTGCTGGAGCTCCTGG ACCCAAAGGAATAAAGGGAGACTCTAGAACAATCACCACCAAAGGGGAGCGAGGACAGCCAGGTATCCCT GGTGTACACGGAATGAAAGGTGATGACGGCGTCCCAGGACGGGATGGGCTGGATGGATTCCCTGGCCTGC CTGGCCCCCCGGGCGATGGCATCAAAGGCCCTCCAGGGGATGCAGGTCTCCCTGGTGTACCCGGAACCAA GGGCTTTCCAGGAGACATCGGTCCTCCAGGACAGGGCTTACCAGGTCCGAAAGGCGAGCGTGGTTTCCCT GGAGACGCTGGGTTGCCTGGACCTCCGGGCTTCCCTGGTCCTCCAGGTCCCCCAGGAACCCCAGGACAGA GAGATTGTGACACGGGTGTGAAAAGACCTATCGGAGGCGGCCAGCAAGTGGTCGTTCAGCCAGGTTGCAT TGAAGGCCCCACAGGATCACCTGGCCAGCCAGGACCCCCAGGCCCCACAGGTGCCAAAGGCGTCAGAGGA ATGCCAGGATTCCCAGGAGCTTCTGGAGAACAAGGGCTCAAGGGCTTTCCAGGAGACCCAGGTCGAGAAG GCTTCCCAGGGCCCCCAGGGTTCATGGGACCCCGAGGATCCAAAGGTACCACAGGCCTCCCTGGCCCAGA TGGACCCCCAGGCCCCATTGGACTTCCAGGACCAGCTGGACCCCCTGGGGACAGAGGGATTCCAGGAGAA GTGCTAGGGGCCCAGCCTGGGACACGAGGAGATGCTGGACTTCCAGGACAGCCTGGGCTGAAAGGGCTCC CAGGAGAAACAGGAGCACCGGGATTCAGAGGAAGCCAAGGGATGCCCGGGATGCCAGGGCTTAAAGGTCA GCCAGGCTTCCCAGGACCTTCGGGACAGCCAGGACAGTCTGGGCCCCCAGGACAACATGGATTCCCAGGA ACTCCTGGCCGAGAGGGGCCTTTGGGGCAGCCAGGCTCCCCTGGCCTTGGAGGTTTGCCTGGAGACAGGG GCGAGCCTGGTGACCCTGGTGTCCCTGGCCCTGTGGGCATGAAAGGTCTGTCTGGGGACAGAGGTGACGC CGGTATGTCAGGCGAGCGTGGTCACCCTGGAAGCCCTGGATTTAAAGGAATGGCAGGGATGCCTGGTATC CCTGGGCAGAAAGGTGATCGAGGGTCGCCTGGAATGGACGGTTTCCAGGGCATGTTGGGACTTAAGGGAA GACAGGGCTTCCCAGGGACCAAAGGAGAAGCTGGATTTTTTGGAGTTCCTGGTTTGAAGGGCCTGCCTGG CGAGCCAGGGGTTAAAGGAAACCGAGGAGACCGGGGGCCCCCAGGACCACCTCCTCTCATCCTGCCGGGG ATGAAGGACATCAAGGGAGAAAAGGGAGATGAAGGACCAATGGGCCTGAAAGGGTATCTGGGCTTAAAAG GCATCCAAGGAATGCCCGGAGTCCCCGGAGTGTCTGGATTCCCTGGGCTACCTGGAAGGCCTGGCTTCAT CAAAGGAGTCAAGGGAGACATCGGAGTCCCTGGCACACCAGGCTTGCCGGGATTCCCTGGGGTGTCTGGC CCTCCTGGAATTACCGGGTTTCCAGGATTCACAGGCAGCCGGGGCGAGAAGGGTACTCCAGGAGTAGCAG GAGTTTTTGGCGAGACCGGCCCTACTGGGGACTTTGGTGACATTGGGGACACTGTGGACTTACCAGGGAG CCCAGGCCTGAAGGGGGAACGGGGCATCACGGGAATTCCAGGTCTCAAGGGATTCTTTGGAGAGAAAGGA GCTGCGGGTGACATTGGATTTCCTGGGATAACGGGCATGGCTGGAGCTCAGGGCTCTCCTGGACTTAAAG GACAGACAGGCTTTCCAGGGCTCACAGGGCTGCAAGGGCCACAGGGAGAGCCTGGACGGATCGGAATACC CGGTGACAAGGGTGATTTCGGCTGGCCAGGCGTACCAGGTCTACCAGGTTTTCCTGGGATCCGGGGCATC AGCGGATTGCACGGCCTGCCAGGCACCAAAGGCTTCCCTGGATCACCAGGTGTTGATGCTCATGGAGACC CAGGGTTCCCAGGCCCCACTGGAGACAGGGGTGACCGGGGAGAGGCCAACACACTTCCAGGCCCCGTGGG AGTTCCAGGGCAGAAAGGGGAGCGGGGAACCCCAGGGGAACGTGGCCCAGCTGGAAGCCCAGGACTTCAG GGTTTCCCTGGTATCTCTCCACCATCCAACATCTCTGGGTCACCTGGTGATGTAGGCGCACCAGGAATAT TTGGCTTGCAAGGCTACCAAGGCCCTCCAGGACCACCTGGGCCAAACGCACTTCCTGGAATCAAAGGAGA TGAGGGGAGCTCTGGAGCTGCAGGATTCCCTGGACAGAAAGGATGGGTTGGGGACCCAGGGCCCCAGGGC CAGCCTGGTGTACTCGGTCTTCCGGGGGAGAAAGGGCCCAAGGGTGAACAAGGATTCATGGGCAACACCG GGCCCTCTGGGGCCGTGGGTGACAGAGGCCCCAAAGGACCCAAAGGCGACCAAGGATTCCCAGGTGCTCC TGGCTCTATGGGGTCCCCAGGAATTCCTGGCATCCCCCAGAAGATTGCTGTCCAGCCTGGAACGCTGGGT CCCCAGGGCAGGAGAGGCCTTCCTGGGGCCCTGGGAGAGATAGGGCCGCAGGGCCCTCCTGGAGATCCAG GCTTCCGTGGGGCCCCAGGCAAGGCTGGGCCTCAGGGCAGAGGTGGCGTGTCTGCTGTTCCAGGGTTCCG GGGAGACCAAGGGCCCATGGGACACCAGGGTCCAGTTGGCCAGGAAGGGGAGCCAGGCCGTCCAGGGAGC CCAGGCCTGCCAGGGATGCCAGGCCGCAGTGTGAGCATCGGCTACCTCCTGGTGAAGCACAGCCAAACGG ACCAGGAACCCATGTGCCCTGTGGGCATGAACAAGCTCTGGAGTGGGTACAGCCTGCTATATTTTGAGGG CCAGGAGAAAGCGCACAACCAGGACCTAGGACTGGCAGGCTCCTGCCTGGCACGCTTCAGCACCATGCCT TTCCTGTACTGCAATCCGGGTGACGTCTGCTACTATGCCAGCCGCAACGACAAGTCCTACTGGCTCTCCA CCACGGCCCCTCTGCCCATGATGCCCGTGGCTGAGGAGGAAATCAAGCCCTACATCAGCCGCTGCTCTGT GTGCGAGGCTCCGGCCGTGGCCATTGCCGTGCACAGCCAGGATACCTCTATACCCCACTGCCCGGCTGGG TGGCGGAGTTTGTGGATCGGATATTCATTCCTCATGCACACTGCAGCCGGGGATGAAGGCGGTGGCCAGT CACTGGTGTCGCCGGGCAGCTGTCTAGAGGACTTCCGTGCAACGCCATTTATCGAGTGTAACGGGGGCCG TGGTACCTGCCACTACTTCGCTAACAAGTACAGCTTCTGGCTGACCACGATCCCAGAGCAGAACTTCCAG AGCACACCATCCGCTGACACGCTCAAGGCTGGCCTCATCCGCACGCACATCAGCCGCTGCCAAGTGTGCA TGAAGAATCTGTGA
Translation (1707 aa): MDRVRFKASGPPLRGWLLLATVTVGLLAQSVLGGVKKLDVPCGGRDCSGGCQCYPEKGARGQPGAVGPQG YNGPPGLQGFPGLQGRKGDKGERGVPGPTGPKGDVGARGVSGFPGADGIPGHPGQGGPRGRPGYDGCNGT RGDAGPQGPSGSGGFPGLPGPQGPKGQKGEPYALSKEDRDKYRGEPGEPGLVGYQGPPGRPGPIGQMGPM GAPGRPGPPGPPGPKGQPGNRGLGFYGQKGEKGDIGQPGPNGIPSDITLVGPTTSTIHPDLYKGEKGDEG EQGIPGVISKGEEGIMGFPGIRGFPGLDGEKGVVGQKGSRGLDGFQGPSGPRGPKGERGEQGPPGPSVYS PHPSLAKGARGDPGFQGAHGEPGSRGEPGEPGTAGPPGPSVGDEDSMRGLPGEMGPKGFSGEPGSPARYL GPPGADGRPGPQGVPGPAGPPGPDGFLFGLKGSEGRVGYPGPSGFPGTRGQKGWKGEAGDCQCGQVIGGL PGLPGPKGFPGVNGELGKKGDQGDPGLHGIPGFPGFKGAPGVAGAPGPKGIKGDSRTITTKGERGQPGIP GVHGMKGDDGVPGRDGLDGFPGLPGPPGDGIKGPPGDAGLPGVPGTKGFPGDIGPPGQGLPGPKGERGFP GDAGLPGPPGFPGPPGPPGTPGQRDCDTGVKRPIGGGQQVVVQPGCIEGPTGSPGQPGPPGPTGAKGVRG MPGFPGASGEQGLKGFPGDPGREGFPGPPGFMGPRGSKGTTGLPGPDGPPGPIGLPGPAGPPGDRGIPGE VLGAQPGTRGDAGLPGQPGLKGLPGETGAPGFRGSQGMPGMPGLKGQPGFPGPSGQPGQSGPPGQHGFPG TPGREGPLGQPGSPGLGGLPGDRGEPGDPGVPGPVGMKGLSGDRGDAGMSGERGHPGSPGFKGMAGMPGI PGQKGDRGSPGMDGFQGMLGLKGRQGFPGTKGEAGFFGVPGLKGLPGEPGVKGNRGDRGPPGPPPLILPG MKDIKGEKGDEGPMGLKGYLGLKGIQGMPGVPGVSGFPGLPGRPGFIKGVKGDIGVPGTPGLPGFPGVSG PPGITGFPGFTGSRGEKGTPGVAGVFGETGPTGDFGDIGDTVDLPGSPGLKGERGITGIPGLKGFFGEKG AAGDIGFPGITGMAGAQGSPGLKGQTGFPGLTGLQGPQGEPGRIGIPGDKGDFGWPGVPGLPGFPGIRGI SGLHGLPGTKGFPGSPGVDAHGDPGFPGPTGDRGDRGEANTLPGPVGVPGQKGERGTPGERGPAGSPGLQ GFPGISPPSNISGSPGDVGAPGIFGLQGYQGPPGPPGPNALPGIKGDEGSSGAAGFPGQKGWVGDPGPQG QPGVLGLPGEKGPKGEQGFMGNTGPSGAVGDRGPKGPKGDQGFPGAPGSMGSPGIPGIPQKIAVQPGTLG PQGRRGLPGALGEIGPQGPPGDPGFRGAPGKAGPQGRGGVSAVPGFRGDQGPMGHQGPVGQEGEPGRPGS PGLPGMPGRSVSIGYLLVKHSQTDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMP FLYCNPGDVCYYASRNDKSYWLSTTAPLPMMPVAEEEIKPYISRCSVCEAPAVAIAVHSQDTSIPHCPAG WRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYFANKYSFWLTTIPEQNFQ STPSADTLKAGLIRTHISRCQVCMKNL
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