U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    HPODL_04028 Vacuolar protein-sorting-associated protein 36 [ Ogataea parapolymorpha DL-1 ]

    Gene ID: 25773459, updated on 30-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    HPODL_04028
    Gene description
    Vacuolar protein-sorting-associated protein 36
    Locus tag
    HPODL_04028
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ogataea parapolymorpha DL-1 (strain: DL-1, type-material: holotype of Candida parapolymorpha)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Ogataea
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See HPODL_04028 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    1
    Sequence:
    Chromosome: V; NC_027862.1 (460197..461987, complement)

    Chromosome V - NC_027862.1Genomic Context describing neighboring genes Neighboring gene Polyprotein (gag/pol) of Ty1/Copia retrotransposon Neighboring gene Protein HYM1 Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_027862.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ESCRT II complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in late endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Vacuolar protein-sorting-associated protein 36

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_027862.1 Reference assembly

      Range
      460197..461987 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014078809.1 → XP_013934284.1  Vacuolar protein-sorting-associated protein 36 [Ogataea parapolymorpha DL-1]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      W1QBH9
      Conserved Domains (3) summary
      pfam04157
      Location:312 → 578
      EAP30; EAP30/Vps36 family
      pfam16988
      Location:119 → 174
      Vps36-NZF-N; Vacuolar protein sorting 36 NZF-N zinc-finger domain
      cl17171
      Location:13 → 129
      PH-like; Pleckstrin homology-like domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases