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    Nrl neural retina leucine zipper [ Heterocephalus glaber (naked mole-rat) ]

    Gene ID: 101705497, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Nrl
    Gene description
    neural retina leucine zipper
    Locus tag
    GW7_11973
    See related
    Ensembl:ENSHGLG00000003953
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Heterocephalus glaber
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
    Orthologs
    human mouse all
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    Genomic context

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    See Nrl in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624820.1 (8436469..8449354)

    NW_004624820.1Genomic Context describing neighboring genes Neighboring gene DDB1 and CUL4 associated factor 11 Neighboring gene Na(+)/H(+) exchange regulatory cofactor NHE-RF1 pseudogene Neighboring gene phosphoenolpyruvate carboxykinase 2, mitochondrial Neighboring gene copine 6 Neighboring gene capping protein regulator and myosin 1 linker 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004624820 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neural retina-specific leucine zipper protein
    Names
    Neural retina-specific leucine zipper protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HetGla_female_1.0 Primary Assembly

    Genomic

    1. NW_004624820.1 Reference HetGla_female_1.0 Primary Assembly

      Range
      8436469..8449354
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004864136.3 → XP_004864193.1  neural retina-specific leucine zipper protein isoform X1

      See identical proteins and their annotated locations for XP_004864193.1

      UniProtKB/TrEMBL
      G5B2A1
      Related
      ENSHGLP00000005400.1, ENSHGLT00000005470.1
      Conserved Domains (2) summary
      cd14718
      Location:154 → 223
      bZIP_Maf_large; Basic leucine zipper (bZIP) domain of large musculoaponeurotic fibrosarcoma (Maf) proteins: a DNA-binding and dimerization domain
      pfam08383
      Location:67 → 101
      Maf_N; Maf N-terminal region

    2. XM_021243844.1 → XP_021099503.1  neural retina-specific leucine zipper protein isoform X2

      Conserved Domains (1) summary
      cd14718
      Location:49 → 118
      bZIP_Maf_large; Basic leucine zipper (bZIP) domain of large musculoaponeurotic fibrosarcoma (Maf) proteins: a DNA-binding and dimerization domain

    3. XM_004864138.3 → XP_004864195.1  neural retina-specific leucine zipper protein isoform X1

      See identical proteins and their annotated locations for XP_004864195.1

      UniProtKB/TrEMBL
      G5B2A1
      Conserved Domains (2) summary
      cd14718
      Location:154 → 223
      bZIP_Maf_large; Basic leucine zipper (bZIP) domain of large musculoaponeurotic fibrosarcoma (Maf) proteins: a DNA-binding and dimerization domain
      pfam08383
      Location:67 → 101
      Maf_N; Maf N-terminal region

    4. XM_021243843.1 → XP_021099502.1  neural retina-specific leucine zipper protein isoform X1

      UniProtKB/TrEMBL
      G5B2A1
      Conserved Domains (2) summary
      cd14718
      Location:154 → 223
      bZIP_Maf_large; Basic leucine zipper (bZIP) domain of large musculoaponeurotic fibrosarcoma (Maf) proteins: a DNA-binding and dimerization domain
      pfam08383
      Location:67 → 101
      Maf_N; Maf N-terminal region
    Nucleotide Protein
    Heading Accession and Version

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