Cloning a cDNA from human NK/T cells which codes for a protein with high proline content

Biochim Biophys Acta. 1995 Oct 17;1264(1):19-22. doi: 10.1016/0167-4781(95)00159-e.

Abstract

A cDNA clone, B4-2, was isolated from a natural killer (NK) minus T cell subtractive library. The B4-2 clone coded for an mRNA of 2061 bp in length. It encodes a deduced 327 aa protein with a calculated molecular mass of 35.2 kDa. Searching of B4-2 DNA and protein sequences against various databases revealed no high homology to other sequences. However, B4-2 has an unusually high proline content (13%), contains a putative nuclear targeting sequence, and has several SPXX motifs which are frequently found in gene regulatory proteins. One of the stretches of prolines in B4-2 closely resembles the ligand for proteins with SH3 domains. Northern hybridization data showed that B4-2 is not a lymphoid specific gene and is expressed in a hepatoma cell line and also weakly transcribed or absent in a variety of other cells. A polyclonal antiserum raised against recombinant B4-2 recognizes a 32-34 kDa protein in lymphocytes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Cloning, Molecular
  • DNA, Complementary / chemistry
  • DNA, Complementary / genetics
  • Humans
  • Killer Cells, Natural / chemistry*
  • Molecular Sequence Data
  • Nuclear Proteins*
  • Proline / analysis*
  • Proteins / chemistry
  • Proteins / genetics*
  • RNA, Messenger / analysis
  • Recombinant Proteins / genetics
  • Transcription Factors / biosynthesis
  • Transcription Factors / chemistry
  • Transcription Factors / genetics*

Substances

  • DNA, Complementary
  • Nuclear Proteins
  • PNRC1 protein, human
  • Proteins
  • RNA, Messenger
  • Recombinant Proteins
  • Transcription Factors
  • Proline

Associated data

  • GENBANK/U03105