YTHDC1-Modified m6A Methylation of Hsa_circ_0102678 Promotes Keratinocyte Inflammation Induced by Cutibacterium acnes Biofilm through Regulating miR-146a/TRAF6 and IRAK1 Axis

J Innate Immun. 2023;15(1):822-835. doi: 10.1159/000534704. Epub 2023 Oct 30.

Abstract

Introduction: CircRNAs are closely related to many human diseases; however, their role in acne remains unclear. This study aimed to determine the role of hsa_circ_0102678 in regulating inflammation of acne.

Methods: First, microarray analysis was performed to study the expression of circRNAs in acne. Subsequently, RNase R digestion assay and fluorescence in situ hybridization assay were utilized to confirm the characteristics of hsa_circ_0102678. Finally, qRT-PCR, Western blotting analysis, immunoprecipitation, luciferase reporter assay, circRNA probe pull-down assay, biotin-labeled miRNA pull-down assay, RNA immunoprecipitation assay, and m6A dot blot assay were utilized to reveal the functional roles of hsa_circ_0102678 on inflammation induced by C. acnes biofilm in human primary keratinocytes.

Results: Our investigations showed that the expression of hsa_circ_0102678 was significantly decreased in acne tissues, and hsa_circ_0102678 was a type of circRNAs, which was mainly localized in the cytoplasm of primary human keratinocytes. Moreover, hsa_circ_0102678 remarkably affected the expression of IL-8, IL-6, and TNF-α, which induced by C. acnes biofilm. Importantly, mechanistic studies indicated that the YTHDC1 could bind directly to hsa_circ_0102678 and promote the export of N6-methyladenosine-modified hsa_circ_0102678 to the cytoplasm. Besides, hsa_circ_0102678 could bind to miR-146a and sponge miR-146a to promote the expression of IRAK1 and TRAF6.

Conclusion: Our findings revealed a previously unknown process by which hsa_circ_0102678 promoted keratinocyte inflammation induced by C. acnes biofilm via regulating miR-146a/TRAF6 and IRAK1 axis.

Keywords: Acne; CircRNA; Inflammation; YTHDC1; m6A; miR-146a.

MeSH terms

  • Acne Vulgaris* / immunology
  • Acne Vulgaris* / microbiology
  • Biological Transport, Active
  • Cells, Cultured
  • Down-Regulation
  • Humans
  • Inflammation / metabolism
  • Intracellular Signaling Peptides and Proteins* / metabolism
  • Keratinocytes / immunology
  • Keratinocytes / microbiology
  • Nerve Tissue Proteins* / metabolism
  • Propionibacteriaceae* / physiology
  • RNA Splicing Factors* / metabolism
  • RNA, Circular* / genetics

Substances

  • RNA, Circular
  • MIRN146 microRNA, human
  • Tifab protein, human
  • IRAK1 protein, human
  • Intracellular Signaling Peptides and Proteins
  • YTHDC1 protein, human
  • RNA Splicing Factors
  • Nerve Tissue Proteins

Grants and funding

This study was supported by National Natural Science Foundation of China (81773338, 82103749, 82272294); CAMS Innovation Fund for Medical Sciences (2017-I2M-1-017, CIFMS-2021-I2M-1-001); Science and Technology Program of Nanjing, China (2019060001); Jiangsu Provincial “Double Innovation Doctors” Program (Grant No. JSSCBS20211610); Science and Technology Development Foundation of Nanjing Medical University (NMUB2020154).