Protein oxidation increases SAMHD1 binding ssDNA via its regulatory site

Nucleic Acids Res. 2023 Jul 21;51(13):7014-7024. doi: 10.1093/nar/gkad447.

Abstract

SAMHD1 dNTP hydrolase activity places it at the crossroad of several important biological pathways, such as viral restriction, cell cycle regulation, and innate immunity. Recently, a dNTPase independent function for SAMHD1 in homologous recombination (HR) of DNA double-strand breaks has been identified. SAMHD1 function and activity is regulated by several post-translational modifications, including protein oxidation. Here, we showed that oxidation of SAMHD1 increases ssDNA binding affinity and occurs in a cell cycle-dependent manner during S phase consistent with a role in HR. We determined the structure of oxidized SAMHD1 in complex with ssDNA. The enzyme binds ssDNA at the regulatory sites at the dimer interface. We propose a mechanism that oxidation of SAMHD1 acts as a functional switch to toggle between dNTPase activity and DNA binding.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • DNA, Single-Stranded / metabolism
  • Humans
  • Models, Molecular*
  • Oxidation-Reduction
  • PC-3 Cells
  • Protein Binding
  • Protein Structure, Tertiary
  • SAM Domain and HD Domain-Containing Protein 1* / chemistry
  • SAM Domain and HD Domain-Containing Protein 1* / metabolism

Substances

  • SAM Domain and HD Domain-Containing Protein 1
  • DNA, Single-Stranded