Ubiquitination and degradation of NF90 by Tim-3 inhibits antiviral innate immunity

Elife. 2021 Jun 10:10:e66501. doi: 10.7554/eLife.66501.

Abstract

Nuclear factor 90 (NF90) is a novel virus sensor that serves to initiate antiviral innate immunity by triggering stress granule (SG) formation. However, the regulation of the NF90-SG pathway remains largely unclear. We found that Tim-3, an immune checkpoint inhibitor, promotes the ubiquitination and degradation of NF90 and inhibits NF90-SG-mediated antiviral immunity. Vesicular stomatitis virus (VSV) infection induces the up-regulation and activation of Tim-3 in macrophages, which in turn recruit the E3 ubiquitin ligase TRIM47 to the zinc finger domain of NF90 and initiate a proteasome-dependent degradation via K48-linked ubiquitination at Lys297. Targeted inactivation of Tim-3 enhances the NF90 downstream SG formation by selectively increasing the phosphorylation of protein kinase R and eukaryotic translation initiation factor 2α, the expression of SG markers G3BP1 and TIA-1, and protecting mice from VSV challenge. These findings provide insights into the crosstalk between Tim-3 and other receptors in antiviral innate immunity and its related clinical significance.

Keywords: NF90; Tim-3; antiviral innate immunity; immunology; inflammation; mouse; ubiquitination; virus sensor.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cytoplasmic Granules / immunology
  • Cytoplasmic Granules / metabolism
  • Hepatitis A Virus Cellular Receptor 2* / immunology
  • Hepatitis A Virus Cellular Receptor 2* / metabolism
  • Immunity, Innate / immunology*
  • Macrophages / immunology
  • Macrophages / metabolism
  • Mice
  • Nuclear Factor 90 Proteins* / immunology
  • Nuclear Factor 90 Proteins* / metabolism
  • Rhabdoviridae Infections / immunology
  • Ubiquitination / immunology*
  • Vesiculovirus
  • Virus Diseases / immunology*

Substances

  • Havcr2 protein, mouse
  • Hepatitis A Virus Cellular Receptor 2
  • Nuclear Factor 90 Proteins

Grants and funding

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.