Retinoic acid inducibility of the human PDGF-a gene is mediated by 5'-distal DNA motifs that overlap with basal enhancer and vitamin D response elements

Gene Expr. 2007;14(1):1-12. doi: 10.3727/000000007783991763.

Abstract

Retinoic acid (RA) upregulates expression of PDGF ligands and receptors in neonatal rat lung fibroblasts, a process likely to promote maturation of the lung alveolus and possibly microstructures of other organs. A mutational analysis of the gene encoding the PDGF-A ligand has identified a complex retinoic acid response element (RARE) located far upstream of the transcription start site, in a 5'-distal enhanceosome region previously shown to harbor basal and vitamin D-inducible enhancer activity. Maximal RA responsiveness (fourfold) was conferred by nucleotide sequence located between -7064 and -6787, with a variety of deletion and point mutations revealing the importance of at least three nuclear receptor half-sites within the enhancer region (-6851 to -6824), as well as nucleotides located further upstream. Recombinant human retinoic acid receptor/retinoid-X receptor heterodimers bound with high affinity and sequence specificity to multiple regions within the RARE, as demonstrated by electrophoretic mobility shift and DNase I footprinting assays. The addition of RARE activity to previously described functions of the 5'-distal enhanceosome underscores the importance of this region as a key integration point for regulatory control of PDGF-A expression.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5' Flanking Region*
  • Base Sequence
  • Cell Line
  • DNA / chemistry
  • Dose-Response Relationship, Drug
  • Enhancer Elements, Genetic
  • Genes, Reporter
  • Humans
  • Luciferases / metabolism
  • Molecular Sequence Data
  • Platelet-Derived Growth Factor / genetics*
  • Platelet-Derived Growth Factor / metabolism*
  • RNA, Messenger / analysis
  • Receptors, Retinoic Acid / genetics
  • Receptors, Retinoic Acid / metabolism
  • Recombinant Proteins / metabolism
  • Response Elements
  • Retinoic Acid Receptor alpha
  • Retinoid X Receptor alpha / genetics
  • Retinoid X Receptor alpha / metabolism
  • Transfection
  • Tretinoin / pharmacology*
  • Vitamin D / genetics*

Substances

  • Platelet-Derived Growth Factor
  • RARA protein, human
  • RNA, Messenger
  • Rara protein, rat
  • Receptors, Retinoic Acid
  • Recombinant Proteins
  • Retinoic Acid Receptor alpha
  • Retinoid X Receptor alpha
  • platelet-derived growth factor A
  • Vitamin D
  • Tretinoin
  • DNA
  • Luciferases