Characterization of a novel human endogenous retrovirus, HERV-H/F, expressed in human leukemia cell lines

Virology. 2002 Nov 10;303(1):164-73. doi: 10.1006/viro.2002.1615.

Abstract

We have identified and characterized a human endogenous retrovirus (HERV) gag transcript in the human pre-B cell leukemia line Reh. The transcript was found to be a splice product of a structurally intact HERV element located on chromosome 6q13. Its primer binding site is complementary to phenylalanine (F) tRNA, common for the HERV-F family, but the overall genome sequence is closely related to the HERV-H family. The retroviral sequence was therefore designated HERV-H/F. The HERV element shows a distinct mRNA expression pattern among hematopoietic cancer cell lines with expression in some leukemia-derived cell lines of B-lymphoid and myeloid origin. No expression was observed in normal human tissues, indicating a cancer-specific expression pattern. The 5' long terminal repeat (LTR) was tested for promoter activity in HERV-H/F expressing and nonexpressing cell lines. The cell specificity of the LTR-mediated reporter gene expression did not conclusively correlate with endogenous virus expression, indicating that the transcription regulation of this gene is not alone dependent on cell-specific activity of transcription factors.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Cell Line
  • Chromosomes, Human, Pair 6
  • Endogenous Retroviruses / classification
  • Endogenous Retroviruses / genetics*
  • Endogenous Retroviruses / metabolism
  • Genes, gag
  • Genes, pol
  • Humans
  • Molecular Sequence Data
  • Phylogeny
  • Promoter Regions, Genetic
  • RNA, Messenger / analysis
  • Sequence Alignment
  • Terminal Repeat Sequences
  • Transcription, Genetic

Substances

  • RNA, Messenger