Identification in the human candidate tumor suppressor gene HIC-1 of a new major alternative TATA-less promoter positively regulated by p53

J Biol Chem. 2001 Feb 2;276(5):3078-89. doi: 10.1074/jbc.M008690200. Epub 2000 Nov 9.

Abstract

HIC-1 (hypermethylated in cancer 1), a BTB/POZ transcriptional repressor, was isolated as a candidate tumor suppressor gene located at 17p13.3, a region hypermethylated or subject to allelic loss in many human cancers and in the Miller-Dieker syndrome. The human HIC-1 gene is composed of two exons, a short 5'-untranslated exon and a large second coding exon. Recently, two murine HIC-1 isoforms generated by alternative splicing have been described. To determine whether such isoforms also exist in human, we have further analyzed the human HIC-1 locus. Here, we describe and extensively characterize a novel alternative noncoding upstream exon, exon 1b, associated with a major GC-rich promoter. We demonstrate using functional assays that the murine exon 1b previously described as coding from computer analyses of genomic sequences is in fact a noncoding exon highly homologous to its human counterpart. In addition, we report that the human untranslated exon is presumably a coding exon, renamed exon 1a, both in mice and humans. Both types of transcripts are detected in various normal human tissues with a predominance for exon 1b containing transcripts and are up-regulated by TP53, confirming that HIC-1 is a TP53 target gene. Thus, HIC-1 function in the cell is controlled by a complex interplay of transcriptional and translational regulation, which could be differently affected in many human cancers.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing
  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • DNA, Complementary / analysis
  • Exons
  • Gene Expression Regulation*
  • Genes, Tumor Suppressor / genetics
  • Genome, Human
  • Humans
  • Kruppel-Like Transcription Factors
  • Mice
  • Molecular Sequence Data
  • Promoter Regions, Genetic / genetics*
  • Proteins
  • Sequence Homology
  • Transcription Factors / genetics*
  • Transcription, Genetic
  • Tumor Suppressor Protein p53 / physiology*

Substances

  • DNA, Complementary
  • Hic1 protein, mouse
  • Kruppel-Like Transcription Factors
  • Proteins
  • Transcription Factors
  • Tumor Suppressor Protein p53

Associated data

  • GENBANK/AJ404688