PMC Links for GEO Profiles (Select 91095770) - PMC

Yingyue Zhou, Mari Tada, Zhangying Cai, Prabhakar S. Andhey, Amanda Swain, Kelly R. Miller, Susan Gilfillan, Maxim N. Artyomov, Masaki Takao, Akiyoshi Kakita, Marco Colonna

Nat Immunol. Author manuscript; available in PMC 2023 Sep 1.

Published in final edited form as: Nat Immunol. 2023 Mar; 24(3): 545–557. Published online 2023 Jan 19. doi: 10.1038/s41590-022-01403-y

Correction in:: Nat Immunol. 2023 Feb 20

PMCID:: PMC9992145

Abstract Article PDF–6.6M

Select item 95249214.

TYRO protein tyrosine kinase-binding protein predicts favorable overall survival in osteosarcoma and correlates with antitumor immunity

Hai-Ru Xu, Jun-Jie Chen, Jin-Ming Shen, Wei-Hang Ding, Jie Chen

Medicine (Baltimore) 2022 Sep 30; 101(39): e30878. Published online 2022 Sep 30. doi: 10.1097/MD.0000000000030878

PMCID:: PMC9524921

Abstract Article PDF–2.8M

Select item 87909135.

The role of SPI1-TYROBP-FCER1G network in oncogenesis and prognosis of osteosarcoma, and its association with immune infiltration

Jiahua Li, Hui Shi, Zhanyuan Yuan, Zhiheng Wu, Haohao Li, Yuelong Liu, Ming Lu, Ming Lu

BMC Cancer. 2022; 22: 108. Published online 2022 Jan 25. doi: 10.1186/s12885-022-09216-w

PMCID:: PMC8790913

Abstract Article PDF–8.7M

Select item 84812626.

TYROBP, TLR4 and ITGAM regulated macrophages polarization and immune checkpoints expression in osteosarcoma

Tuo Liang, Jiarui Chen, GuoYong Xu, Zide Zhang, Jiang Xue, Haopeng Zeng, Jie Jiang, Tianyou Chen, Zhaojie Qin, Hao Li, Zhen Ye, Yunfeng Nie, Chong Liu, Xinli Zhan

Sci Rep. 2021; 11: 19315. Published online 2021 Sep 29. doi: 10.1038/s41598-021-98637-x

PMCID:: PMC8481262

Abstract Article PDF–8.7M

Select item 82206927.

Elevated TYROBP expression predicts poor prognosis and high tumor immune infiltration in patients with low-grade glioma

Jiajie Lu, Yuecheng Peng, Rihong Huang, Zejia Feng, Yongyang Fan, Haojian Wang, Zhaorong Zeng, Yunxiang Ji, Yezhong Wang, Zhaotao Wang

BMC Cancer. 2021; 21: 723. Published online 2021 Jun 23. doi: 10.1186/s12885-021-08456-6

PMCID:: PMC8220692

Abstract Article PDF–3.2M

Select item 81650308.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 78656329.

Constitutively Activated DAP12 Induces Functional Anti-Tumor Activation and Maturation of Human Monocyte-Derived DC

Robert Dalton, Alexandra Calescibetta, Jun Min Zhou, Michelle Maurin, Grace Ward, Thu Le Trinh, Nhan Tu, Danielle Gilvary, Xianghong Chen, Pingyan Cheng, Elena Kostenko, Sheng Wei, Kenneth L. Wright, Erika A. Eksioglu

Int J Mol Sci. 2021 Feb; 22(3): 1241. Published online 2021 Jan 27. doi: 10.3390/ijms22031241

PMCID:: PMC7865632

Abstract Article PDF–963K

Select item 771406210.

TYROBP is a potential prognostic biomarker of clear cell renal cell carcinoma

Ping Wu, Tingting Xiang, Jing Wang, Run Lv, Guangzhen Wu

FEBS Open Bio. 2020 Dec; 10(12): 2588–2604. Published online 2020 Oct 31. doi: 10.1002/2211-5463.12993

PMCID:: PMC7714062

Abstract Article PDF–6.6M

Select item 758811311.

Three-gene prognostic biomarkers for seminoma identified by weighted gene co-expression network analysis

Hualin Chen, Gang Chen, Yang Pan, Xiaoxiang Jin

PLoS One. 2020; 15(10): e0240943. Published online 2020 Oct 26. doi: 10.1371/journal.pone.0240943

PMCID:: PMC7588113

Abstract Article PDF–2.4M

Select item 716998312.

A reference map of the human binary protein interactome

Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood

Nature. Author manuscript; available in PMC 2020 Oct 8.

Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x

PMCID:: PMC7169983

Abstract Article PDF–5.4M

Select item 673036113.

Impaired Synaptic Function in the Microglial KARAP/DAP12-Deficient Mouse

Anne Roumier, Catherine Béchade, Jean-Christophe Poncer, Karl-Heinz Smalla, Elena Tomasello, Eric Vivier, Eckart D. Gundelfinger, Antoine Triller, Alain Bessis

J Neurosci. 2004 Dec 15; 24(50): 11421–11428. doi: 10.1523/JNEUROSCI.2251-04.2004

PMCID:: PMC6730361

Abstract Article PDF–354K

Select item 649444014.

Integrative approach to sporadic Alzheimer’s disease: deficiency of TYROBP in cerebral Aβ amyloidosis mouse normalizes clinical phenotype and complement subnetwork molecular pathology without reducing Aβ burden

Jean-Vianney Haure-Mirande, Minghui Wang, Mickael Audrain, Tomas Fanutza, Soong Ho Kim, Szilvia Heja, Ben Readhead, Joel T. Dudley, Robert D. Blitzer, Eric E. Schadt, Bin Zhang, Sam Gandy, Michelle E. Ehrlich

Mol Psychiatry. 2019; 24(3): 431–446. Published online 2018 Oct 3. doi: 10.1038/s41380-018-0255-6

Correction in:: Mol Psychiatry. 2019; 24(3): 472.

PMCID:: PMC6494440

Abstract Article PDF–4.4M

Select item 598552815.

Mutations in TYROBP are not a common cause of dementia in a Turkish cohort

Lee Darwent, Susana Carmona, Ebba Lohmann, Gamze Guven, Celia Kun-Rodrigues, Basar Bilgic, Hasmet Hanagasi, Hakan Gurvit, Nihan Erginel-Unaltuna, Meltem Pak, John Hardy, Andrew Singleton, Jose Brás, Rita Guerreiro

Neurobiol Aging. Author manuscript; available in PMC 2018 Jun 4.

Published in final edited form as: Neurobiol Aging. 2017 Oct; 58: 240.e1–240.e3. Published online 2017 Jun 28. doi: 10.1016/j.neurobiolaging.2017.06.019

PMCID:: PMC5985528

Abstract Article PDF–440K

Select item 588909216.

TREM2 is a receptor for β-amyloid which mediates microglial function

Yingjun Zhao, Xilin Wu, Xiaoguang Li, Lu-Lin Jiang, Xun Gui, Yan Liu, Yu Sun, Bing Zhu, Juan C. Piña-Crespo, Muxian Zhang, Ningyan Zhang, Xiaochun Chen, Guojun Bu, Zhiqiang An, Timothy Y. Huang, Huaxi Xu

Neuron. Author manuscript; available in PMC 2019 Mar 7.

Published in final edited form as: Neuron. 2018 Mar 7; 97(5): 1023–1031.e7. doi: 10.1016/j.neuron.2018.01.031

PMCID:: PMC5889092

Abstract Article PDF–1.7M

Select item 548157017.

A split-luciferase complementation, real-time reporting assay enables monitoring of the disease-associated transmembrane protein TREM2 in live cells

Megan M. Varnum, Kevin A. Clayton, Asuka Yoshii-Kitahara, Grant Yonemoto, Lacin Koro, Seiko Ikezu, Tsuneya Ikezu

J Biol Chem. 2017 Jun 23; 292(25): 10651–10663. Published online 2017 May 10. doi: 10.1074/jbc.M116.759159

PMCID:: PMC5481570

Abstract Article PDF–2.5M

Select item 535056318.

Paired Siglec receptors generate opposite inflammatory responses to a human‐specific pathogen

Flavio Schwarz, Corinna S Landig, Shoib Siddiqui, Ismael Secundino, Joshua Olson, Nissi Varki, Victor Nizet, Ajit Varki

EMBO J. 2017 Mar 15; 36(6): 751–760. Published online 2017 Jan 18. doi: 10.15252/embj.201695581

PMCID:: PMC5350563

Abstract Article PDF–2.8M

Select item 515929419.

TYROBP genetic variants in early-onset Alzheimer’s disease

Cyril Pottier, Thomas A. Ravenscroft, Patricia H. Brown, NiCole A. Finch, Matt Baker, Meeia Parsons, Yan W. Asmann, Yingxue Ren, Elizabeth Christopher, Denise Levitch, Marka van Blitterswijk, Carlos Cruchaga, Dominique Campion, Gaël Nicolas, Anne-Claire Richard, Rita Guerreiro, Jose T. Bras, Stephan Zuchner, Michael A. Gonzalez, Guojun Bu, Steven Younkin, David S. Knopman, Keith A. Josephs, Joseph E. Parisi, Ronald C. Petersen, Nilüfer Ertekin-Taner, Neill R. Graff-Radford, Bradley F. Boeve, Dennis W. Dickson, Rosa Rademakers

Neurobiol Aging. Author manuscript; available in PMC 2017 Dec 1.

Published in final edited form as: Neurobiol Aging. 2016 Dec; 48: 222.e9–222.e15. Published online 2016 Aug 8. doi: 10.1016/j.neurobiolaging.2016.07.028

PMCID:: PMC5159294

Abstract Article PDF–773K

Select item 500124020.

Reconstructing directed gene regulatory network by only gene expression data

Lu Zhang, Xi Kang Feng, Yen Kaow Ng, Shuai Cheng Li

BMC Genomics. 2016; 17(Suppl 4): 430. Published online 2016 Aug 18. doi: 10.1186/s12864-016-2791-2

PMCID:: PMC5001240

Abstract Article PDF–2.2M

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