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Select item 92626141.

A dual-activity topoisomerase complex regulates mRNA translation and turnover

Shuaikun Su, Yutong Xue, Alexei Sharov, Yongqing Zhang, Seung Kyu Lee, Jennifer L Martindale, Wen Li, Wai Lim Ku, Keji Zhao, Supriyo De, Weiping Shen, Payel Sen, Myriam Gorospe, Dongyi Xu, Weidong Wang

Nucleic Acids Res. 2022 Jul 8; 50(12): 7013–7033. Published online 2022 Jun 24. doi: 10.1093/nar/gkac538

PMCID:: PMC9262614

Abstract Article PDF–3.6M

Select item 92316232.

ESCPE-1 mediates retrograde endosomal sorting of the SARS-CoV-2 host factor Neuropilin-1

Boris Simonetti, James L. Daly, Lorena Simón-Gracia, Katja Klein, Saroja Weeratunga, Carlos Antón-Plágaro, Allan Tobi, Lorna Hodgson, Philip A. Lewis, Kate J. Heesom, Deborah K. Shoemark, Andrew D. Davidson, Brett M. Collins, Tambet Teesalu, Yohei Yamauchi, Peter J. Cullen

Proc Natl Acad Sci U S A. 2022 Jun 21; 119(25): e2201980119. Published online 2022 Jun 13. doi: 10.1073/pnas.2201980119

PMCID:: PMC9231623

Abstract Article PDF–6.0M

Select item 91197363.

OpenCell: proteome-scale endogenous tagging enables the cartography of human cellular organization

Nathan H. Cho, Keith C. Cheveralls, Andreas-David Brunner, Kibeom Kim, André C. Michaelis, Preethi Raghavan, Hirofumi Kobayashi, Laura Savy, Jason Y. Li, Hera Canaj, James Y.S. Kim, Edna M. Stewart, Christian Gnann, Frank McCarthy, Joana P. Cabrera, Rachel M. Brunetti, Bryant B. Chhun, Greg Dingle, Marco Y. Hein, Bo Huang, Shalin B. Mehta, Jonathan S. Weissman, Rafael Gómez-Sjöberg, Daniel N. Itzhak, Loic A. Royer, Matthias Mann, Manuel D. Leonetti

Science. Author manuscript; available in PMC 2022 Sep 11.

Published in final edited form as: Science. 2022 Mar 11; 375(6585): eabi6983. Published online 2022 Mar 11. doi: 10.1126/science.abi6983

PMCID:: PMC9119736

Abstract Article PDF–3.3M

Select item 81650304.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 76423275.

A trimeric Rab7 GEF controls NPC1-dependent lysosomal cholesterol export

Dick J. H. van den Boomen, Agata Sienkiewicz, Ilana Berlin, Marlieke L. M. Jongsma, Daphne M. van Elsland, J. Paul Luzio, Jacques J. C. Neefjes, Paul J. Lehner

Nat Commun. 2020; 11: 5559. Published online 2020 Nov 3. doi: 10.1038/s41467-020-19032-0

PMCID:: PMC7642327

Abstract Article PDF–12M

Select item 73220676.

RIG-I regulates myeloid differentiation by promoting TRIM25-mediated ISGylation

Song-Fang Wu, Li Xia, Xiao-Dong Shi, Yu-Jun Dai, Wei-Na Zhang, Jun-Mei Zhao, Wu Zhang, Xiang-Qin Weng, Jing Lu, Huang-Ying Le, Sheng-ce Tao, Jiang Zhu, Zhu Chen, Yue-Ying Wang, Saijuan Chen

Proc Natl Acad Sci U S A. 2020 Jun 23; 117(25): 14395–14404. Published online 2020 Jun 8. doi: 10.1073/pnas.1918596117

PMCID:: PMC7322067

Abstract Article PDF–2.7M

Select item 68294017.

The Role of Two-Pore Channels in Norepinephrine-Induced [Ca²⁺]_i Rise in Rat Aortic Smooth Muscle Cells and Aorta Contraction

Sergei K. Trufanov, Elena Yu. Rybakova, Piotr P. Avdonin, Alexandra A. Tsitrina, Irina L. Zharkikh, Nikolay V. Goncharov, Richard O. Jenkins, Pavel V. Avdonin

Cells. 2019 Oct; 8(10): 1144. Published online 2019 Sep 25. doi: 10.3390/cells8101144

PMCID:: PMC6829401

Abstract Article PDF–5.0M

Select item 66690428.

Reconstituted Human TPC1 Is a Proton-Permeable Ion Channel and Is Activated by NAADP or Ca²⁺

Samantha J. Pitt, Andy K. M. Lam, Katja Rietdorf, Antony Galione, Rebecca Sitsapesan

Sci Signal. Author manuscript; available in PMC 2019 Jul 31.

Published in final edited form as: Sci Signal. 2014 May 20; 7(326): ra46. Published online 2014 May 20. doi: 10.1126/scisignal.2004854

PMCID:: PMC6669042

Abstract Article PDF–1.5M

Select item 64245609.

Structural mechanisms of phospholipid activation of the human TPC2 channel

Ji She, Weizhong Zeng, Jiangtao Guo, Qingfeng Chen, Xiao-chen Bai, Youxing Jiang

eLife. 2019; 8: e45222. Published online 2019 Mar 12. doi: 10.7554/eLife.45222

PMCID:: PMC6424560

Abstract Article PDF–2.7M

Select item 570077710.

NAADP-evoked Ca²⁺ signals through two-pore channel-1 require arginine residues in the first S4-S5 linker

Sandip Patel, Dev Churamani, Eugen Brailoiu

Cell Calcium. 2017 Dec; 68: 1–4. doi: 10.1016/j.ceca.2017.09.003

PMCID:: PMC5700777

Abstract Article

Select item 553161111.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 533336512.

The human two-pore channel 1 is modulated by cytosolic and luminal calcium

Laura Lagostena, Margherita Festa, Michael Pusch, Armando Carpaneto

Sci Rep. 2017; 7: 43900. Published online 2017 Mar 2. doi: 10.1038/srep43900

PMCID:: PMC5333365

Abstract Article PDF–1.3M

Select item 461721113.

The BioPlex Network: A Systematic Exploration of the Human Interactome

Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2016 Jul 16.

Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043

PMCID:: PMC4617211

Abstract Article PDF–2.2M

Select item 459459514.

Two-pore channel 1 interacts with citron kinase, regulating completion of cytokinesis

Jaime S Horton, Clay T Wakano, Mark Speck, Alexander J Stokes

Channels (Austin) 2015 Jan-Feb; 9(1): 21–29. Published online 2015 Feb 9. doi: 10.4161/19336950.2014.978676

PMCID:: PMC4594595

Abstract Article PDF–583K

Select item 455058715.

Two pore channels control Ebolavirus host cell entry and are drug targets for disease treatment

Yasuteru Sakurai, Andrey A. Kolokoltsov, Cheng-Chang Chen, Michael W. Tidwell, William E. Bauta, Norbert Klugbauer, Christian Grimm, Christian Wahl-Schott, Martin Biel, Robert A. Davey

Science. Author manuscript; available in PMC 2016 Feb 27.

Published in final edited form as: Science. 2015 Feb 27; 347(6225): 995–998. doi: 10.1126/science.1258758

PMCID:: PMC4550587

Abstract Article PDF–724K

Select item 429447616.

Organelle-specific Subunit Interactions of the Vertebrate Two-pore Channel Family

Oluseye A. Ogunbayo, Yingmin Zhu, Bing Shen, Ejaife Agbani, Jie Li, Jianjie Ma, Michael X. Zhu, A. Mark Evans

J Biol Chem. 2015 Jan 9; 290(2): 1086–1095. Published online 2014 Dec 1. doi: 10.1074/jbc.M114.610493

PMCID:: PMC4294476

Abstract Article PDF–2.8M

Select item 424695217.

The Two-pore channel (TPC) interactome unmasks isoform-specific roles for TPCs in endolysosomal morphology and cell pigmentation

Yaping Lin-Moshier, Michael V. Keebler, Robert Hooper, Michael J. Boulware, Xiaolong Liu, Dev Churamani, Mary E. Abood, Timothy F. Walseth, Eugen Brailoiu, Sandip Patel, Jonathan S. Marchant

Proc Natl Acad Sci U S A. 2014 Sep 9; 111(36): 13087–13092. Published online 2014 Aug 25. doi: 10.1073/pnas.1407004111

PMCID:: PMC4246952

Abstract Article PDF–1.2M

Select item 357813118.

Preliminary evidence of genetic determinants of adiponectin response to fenofibrate in the Genetics of Lipid Lowering Drugs and Diet Network

S Aslibekyan, P An, AC Frazier-Wood, EK Kabagambe, MR Irvin, RJ Straka, HK Tiwari, MY Tsai, PN Hopkins, IB Borecki, JM Ordovas, DK Arnett

Nutr Metab Cardiovasc Dis. Author manuscript; available in PMC 2014 Oct 1.

Published in final edited form as: Nutr Metab Cardiovasc Dis. 2013 Oct; 23(10): 10.1016/j.numecd.2012.07.010. Published online 2012 Nov 11. doi: 10.1016/j.numecd.2012.07.010

PMCID:: PMC3578131

Abstract Article PDF–548K

Select item 347518619.

TPC Proteins Are Phosphoinositide-activated Sodium-selective Ion Channels in Endosomes and Lysosomes

Xiang Wang, Xiaoli Zhang, Xian-ping Dong, Mohammad Samie, Xinran Li, Xiping Cheng, Andrew Goschka, Dongbiao Shen, Yandong Zhou, Janice Harlow, Michael X. Zhu, David E. Clapham, Dejian Ren, Haoxing Xu

Cell. Author manuscript; available in PMC 2013 Oct 12.

Published in final edited form as: Cell. 2012 Oct 12; 151(2): 372–383. doi: 10.1016/j.cell.2012.08.036

PMCID:: PMC3475186

Abstract Article PDF–3.4M

Select item 337022120.

Membrane Potential Regulates Nicotinic Acid Adenine Dinucleotide Phosphate (NAADP) Dependence of the pH- and Ca²⁺-sensitive Organellar Two-pore Channel TPC1

Volodymyr Rybalchenko, Malini Ahuja, Jessica Coblentz, Dev Churamani, Sandip Patel, Krill Kiselyov, Shmuel Muallem

J Biol Chem. 2012 Jun 8; 287(24): 20407–20416. Published online 2012 Apr 12. doi: 10.1074/jbc.M112.359612

PMCID:: PMC3370221

Abstract Article PDF–2.4M

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