Entry - *611935 - METABOLISM OF COBALAMIN ASSOCIATED D; MMADHC - OMIM
 
* 611935

METABOLISM OF COBALAMIN ASSOCIATED D; MMADHC


Alternative titles; symbols

MMADHC GENE
CHROMOSOME 2 OPEN READING FRAME 25; C2ORF25


HGNC Approved Gene Symbol: MMADHC

Cytogenetic location: 2q23.2     Genomic coordinates (GRCh38): 2:149,569,637-149,587,775 (from NCBI)


Gene-Phenotype Relationships
Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
2q23.2 Homocystinuria, cblD type, variant 1 277410 AR 3
Methylmalonic aciduria and homocystinuria, cblD type 277410 AR 3
Methylmalonic aciduria, cblD type, variant 2 277410 AR 3

TEXT

Description

Vitamin B12 (cobalamin) is an essential cofactor in several metabolic pathways. Intracellular conversion of cobalamin to adenosylcobalamin in mitochondria and to methylcobalamin in cytoplasm is necessary for homeostasis of methylmalonic acid and homocysteine. The MMADHC gene encodes a protein involved in an early step of cobalamin metabolism (Coelho et al., 2008).


Cloning and Expression

By RT-PCR of fibroblast mRNA, Coelho et al. (2008) obtained a full-length cDNA for C2ORF25. The deduced 296-amino acid protein has a calculated molecular mass of 32.8 kD. It has an N-terminal mitochondrial leader sequence and a putative vitamin B12-binding motif, NxHxxG, at residues 81 through 86. EST database analysis suggested that C2ORF25 is highly expressed in most tissues.


Gene Structure

Coelho et al. (2008) determined that the C2ORF25 gene contains 8 exons and spans about 18 kb.


Mapping

By genomic sequence analysis, Coelho et al. (2008) mapped the C2ORF25 gene to chromosome 2q23.2.


Molecular Genetics

Coelho et al. (2008) identified biallelic mutations in the C2ORF25 gene in 7 patients with cblD patients with homocystinuria (see 277410) (611935.0001-611935.0003), methylmalonic aciduria (611935.0004-611935.0006), and combined homocystinuria and methylmalonic aciduria (MAHCD; 611935.0007-611935.0009). Some of the patients had previously been reported by Goodman et al. (1970), Cooper et al. (1990), and Suormala et al. (2004). In vitro functional expression studies showed that wildtype C2ORF25 rescued individual mutant cellular phenotypes. There appeared to be some correlation between biochemical phenotype and location of the mutation: those with methylmalonic aciduria had mutations toward the N terminus, whereas those with homocystinuria and the combined biochemical phenotype had mutations toward the C terminus.


Genotype/Phenotype Correlations

Stucki et al. (2012) studied the effect of various MMADHC constructs on protein function in cell lines. For example, mutant alleles associated with the cblD-homocystinuria (HC) phenotype were unable to rescue MeCbl synthesis, whereas mutant alleles associated with the cblD-methylmalonic aciduria (MMA) phenotype could restore MeCbl synthesis. In combined cblD-MMA/HC cells, improving mitochondrial targeting of MMADHC increased the formation of AdoCbl with a concomitant decrease in MeCbl formation. In cblD-MMA cells, this effect was dependent on the mutation and showed a negative correlation with endogenous MMADHC mRNA levels. The findings supported the hypothesis that the MMADHC protein contains various domains for targeting the protein towards the mitochondria, MeCbl synthesis, and AdoCbl synthesis. There is a delicate balance between cytosolic MeCbl and mitochondrial AdoCbl synthesis, suggesting that the cblD protein is a branch point in intracellular cobalamin trafficking. Detailed data analysis indicated that the sequence after Met116 is sufficient for MeCbl synthesis, whereas the additional sequence between Met62 and Met116 is required for AdoCbl synthesis. The nature and location of mutations within the protein thus determines 1 of the 3 biochemical phenotypes, combined MMA/HC, isolated MMA, or isolated HC.


Nomenclature

The Human Gene Nomenclature Committee designated this gene MMADHC (methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria).


ALLELIC VARIANTS ( 9 Selected Examples):

.0001 HOMOCYSTINURIA, cblD TYPE, VARIANT 1

MMADHC, LEU259PRO
  
RCV000000797...

In an Irish boy, born of consanguineous parents, with homocystinuria complementation group cblD (see 277410), Coelho et al. (2008) identified a homozygous 776C-T transition in the MMADHC gene, resulting in a leu259-to-pro (L259P) substitution. The mutation was not identified in 100 ethnically matched control chromosomes. The patient had been reported by Suormala et al. (2004) and had developmental delay, spastic ataxia, delayed visual evoked potentials, and increased mean corpuscular volume.


.0002 HOMOCYSTINURIA, cblD TYPE, VARIANT 1

MMADHC, THR182ASN
  
RCV000000798

In an Italian boy with homocystinuria type cblD (see 277410), Coelho et al. (2008) identified compound heterozygosity for 2 mutations in the MMADHC gene: a 545C-A transversion resulting in a thr182-to-asn (T182N) substitution, and a 746A-G transition resulting in a tyr249-to-cys (Y249C; 611935.0003) substitution. Neither mutation was identified in 100 ethnically matched control chromosomes. He was diagnosed at age 3 months and showed hypotonia, nystagmus, dystonia, seizures, and megaloblastic anemia.


.0003 HOMOCYSTINURIA, cblD TYPE, VARIANT 1

MMADHC, TYR249CYS
  
RCV000000799...

For discussion of the tyr249-to-cys (Y249C) mutation in the MMADHC gene that was found in compound heterozygous state in a patient with homocystinuria type cblD (see 277410) by Coelho et al. (2008), see 611935.0002.


.0004 METHYLMALONIC ACIDURIA, cblD TYPE, VARIANT 2

MMADHC, 8-BP DEL, NT57
  
RCV000000800...

In an Indian boy with methylmalonic aciduria complementation group cblD (see 277410), Coelho et al. (2008) identified a homozygous 8-bp deletion (57delCTCTTTAG) in the MMADHC gene, resulting in a frameshift and premature termination at codon 20. The patient was previously reported by Suormala et al. (2004). He was born prematurely at 32 weeks' gestation and showed severe respiratory distress syndrome, necrotizing enterocolitis, and seizures.


.0005 METHYLMALONIC ACIDURIA, cblD TYPE, VARIANT 2

MMADHC, ARG54TER
  
RCV000000801...

In a Haitian boy with methylmalonic aciduria type cblD (see 277410), Coelho et al. (2008) identified compound heterozygosity for 2 mutations in the MMADHC gene: a 160C-T transition resulting in an arg54-to-ter (R54X) substitution, and an 18-bp duplication (611935.0006) resulting in duplication of residues 103 to 108. He was diagnosed at age 11 months, and had severe ketotic coma, dehydration, hyperammonemia, leukopenia, and thrombocytopenia.


.0006 METHYLMALONIC ACIDURIA, cblD TYPE, VARIANT 2

MMADHC, 18-BP DUP, NT307
  
RCV000000802...

For discussion of the 18-bp duplication in the MMADHC gene that was found in compound heterozygous state in a patient with methylmalonic aciduria type cblD (see 277410) by Coelho et al. (2008), see 611935.0005.


.0007 METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA, cblD TYPE

MMADHC, ARG250TER
  
RCV000000803...

In a Spanish American boy with combined methylmalonic aciduria and homocystinuria complementation group cblD (MAHCD; 277410) originally reported by Goodman et al. (1970), Coelho et al. (2008) identified a homozygous 748C-T transition in the MMADHC gene, resulting in an arg250-to-ter (R250X) substitution. The boy was born of consanguineous parents and had an acute psychotic episode, marfanoid appearance, nystagmus, mild mental retardation, and increased mean corpuscular volume.


.0008 METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA, cblD TYPE

MMADHC, 1-BP DUP, 419A
  
RCV000000804

In a Scandinavian girl with combined methylmalonic aciduria and homocystinuria complementation group cblD (MAHCD; 277410), Coelho et al. (2008) identified a homozygous 1-bp duplication (419dupA) in the MMADHC gene, resulting in a tyr140-to-ter (Y140X) substitution. She presented in early infancy with developmental delay, seizures, and megaloblastic anemia.


.0009 METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA, cblD TYPE

MMADHC, IVS7DS, 4-BP DEL
  
RCV000000805

In an Italian boy with combined methylmalonic aciduria and homocystinuria complementation group cblD (MAHCD; 277410), born of consanguineous parents, Coelho et al. (2008) identified a homozygous 4-bp deletion (696+1delGTGA) in intron 7 of the MMADHC gene, resulting in the skipping of exon 7. The patient was diagnosed at age 22 days and showed poor feeding, encephalopathy, seizures, and increased mean corpuscular volume.


REFERENCES

  1. Coelho, D., Suormala, T., Stucki, M., Lerner-Ellis, J. P., Rosenblatt, D. S., Newbold, R. F., Baumgartner, M. R., Fowler, B. Gene identification for the cblD defect of vitamin B12 metabolism. New Eng. J. Med. 358: 1454-1464, 2008. [PubMed: 18385497, related citations] [Full Text]

  2. Cooper, B. A., Rosenblatt, D. S., Watkins, D. Methylmalonic aciduria due to a new defect in adenosylcobalamin accumulation by cells. Am. J. Hemat. 34: 115-120, 1990. [PubMed: 2339678, related citations] [Full Text]

  3. Goodman, S. I., Moe, P. G., Hammond, K. B., Mudd, S. H., Uhlendorf, B. W. Homocystinuria with methylmalonic aciduria: two cases in a sibship. Biochem. Med. 4: 500-515, 1970. [PubMed: 5524089, related citations] [Full Text]

  4. Stucki, M., Coelho, D., Suormala, T., Burda, P., Fowler, B., Baumgartner, M. R. Molecular mechanisms leading to three different phenotypes in the cblD defect of intracellular cobalamin metabolism. Hum. Molec. Genet. 21: 1410-1418, 2012. [PubMed: 22156578, related citations] [Full Text]

  5. Suormala, T., Baumgartner, M. R., Coelho, D., Zavadakova, P., Kozich, V., Koch, H. G., Berghauser, M., Wraith, J. E., Burlina, A., Sewell, A., Herwig, J., Fowler, B. The cblD defect causes either isolated or combined deficiency of methylcobalamin and adenosylcobalamin synthesis. J. Biol. Chem. 279: 42742-42749, 2004. [PubMed: 15292234, related citations] [Full Text]


Cassandra L. Kniffin - updated : 6/24/2013
Cassandra L. Kniffin - updated : 4/7/2008
Creation Date:
Patricia A. Hartz : 4/4/2008
carol : 03/10/2021
carol : 01/12/2018
mcolton : 06/15/2015
carol : 9/12/2013
joanna : 8/5/2013
carol : 7/1/2013
ckniffin : 6/24/2013
carol : 1/29/2009
wwang : 4/7/2008
ckniffin : 4/7/2008
mgross : 4/4/2008

* 611935

METABOLISM OF COBALAMIN ASSOCIATED D; MMADHC


Alternative titles; symbols

MMADHC GENE
CHROMOSOME 2 OPEN READING FRAME 25; C2ORF25


HGNC Approved Gene Symbol: MMADHC

Cytogenetic location: 2q23.2     Genomic coordinates (GRCh38): 2:149,569,637-149,587,775 (from NCBI)


Gene-Phenotype Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
2q23.2 Homocystinuria, cblD type, variant 1 277410 Autosomal recessive 3
Methylmalonic aciduria and homocystinuria, cblD type 277410 Autosomal recessive 3
Methylmalonic aciduria, cblD type, variant 2 277410 Autosomal recessive 3

TEXT

Description

Vitamin B12 (cobalamin) is an essential cofactor in several metabolic pathways. Intracellular conversion of cobalamin to adenosylcobalamin in mitochondria and to methylcobalamin in cytoplasm is necessary for homeostasis of methylmalonic acid and homocysteine. The MMADHC gene encodes a protein involved in an early step of cobalamin metabolism (Coelho et al., 2008).


Cloning and Expression

By RT-PCR of fibroblast mRNA, Coelho et al. (2008) obtained a full-length cDNA for C2ORF25. The deduced 296-amino acid protein has a calculated molecular mass of 32.8 kD. It has an N-terminal mitochondrial leader sequence and a putative vitamin B12-binding motif, NxHxxG, at residues 81 through 86. EST database analysis suggested that C2ORF25 is highly expressed in most tissues.


Gene Structure

Coelho et al. (2008) determined that the C2ORF25 gene contains 8 exons and spans about 18 kb.


Mapping

By genomic sequence analysis, Coelho et al. (2008) mapped the C2ORF25 gene to chromosome 2q23.2.


Molecular Genetics

Coelho et al. (2008) identified biallelic mutations in the C2ORF25 gene in 7 patients with cblD patients with homocystinuria (see 277410) (611935.0001-611935.0003), methylmalonic aciduria (611935.0004-611935.0006), and combined homocystinuria and methylmalonic aciduria (MAHCD; 611935.0007-611935.0009). Some of the patients had previously been reported by Goodman et al. (1970), Cooper et al. (1990), and Suormala et al. (2004). In vitro functional expression studies showed that wildtype C2ORF25 rescued individual mutant cellular phenotypes. There appeared to be some correlation between biochemical phenotype and location of the mutation: those with methylmalonic aciduria had mutations toward the N terminus, whereas those with homocystinuria and the combined biochemical phenotype had mutations toward the C terminus.


Genotype/Phenotype Correlations

Stucki et al. (2012) studied the effect of various MMADHC constructs on protein function in cell lines. For example, mutant alleles associated with the cblD-homocystinuria (HC) phenotype were unable to rescue MeCbl synthesis, whereas mutant alleles associated with the cblD-methylmalonic aciduria (MMA) phenotype could restore MeCbl synthesis. In combined cblD-MMA/HC cells, improving mitochondrial targeting of MMADHC increased the formation of AdoCbl with a concomitant decrease in MeCbl formation. In cblD-MMA cells, this effect was dependent on the mutation and showed a negative correlation with endogenous MMADHC mRNA levels. The findings supported the hypothesis that the MMADHC protein contains various domains for targeting the protein towards the mitochondria, MeCbl synthesis, and AdoCbl synthesis. There is a delicate balance between cytosolic MeCbl and mitochondrial AdoCbl synthesis, suggesting that the cblD protein is a branch point in intracellular cobalamin trafficking. Detailed data analysis indicated that the sequence after Met116 is sufficient for MeCbl synthesis, whereas the additional sequence between Met62 and Met116 is required for AdoCbl synthesis. The nature and location of mutations within the protein thus determines 1 of the 3 biochemical phenotypes, combined MMA/HC, isolated MMA, or isolated HC.


Nomenclature

The Human Gene Nomenclature Committee designated this gene MMADHC (methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria).


ALLELIC VARIANTS 9 Selected Examples):

.0001   HOMOCYSTINURIA, cblD TYPE, VARIANT 1

MMADHC, LEU259PRO
SNP: rs118204044, gnomAD: rs118204044, ClinVar: RCV000000797, RCV003147271

In an Irish boy, born of consanguineous parents, with homocystinuria complementation group cblD (see 277410), Coelho et al. (2008) identified a homozygous 776C-T transition in the MMADHC gene, resulting in a leu259-to-pro (L259P) substitution. The mutation was not identified in 100 ethnically matched control chromosomes. The patient had been reported by Suormala et al. (2004) and had developmental delay, spastic ataxia, delayed visual evoked potentials, and increased mean corpuscular volume.


.0002   HOMOCYSTINURIA, cblD TYPE, VARIANT 1

MMADHC, THR182ASN
SNP: rs118204045, gnomAD: rs118204045, ClinVar: RCV000000798

In an Italian boy with homocystinuria type cblD (see 277410), Coelho et al. (2008) identified compound heterozygosity for 2 mutations in the MMADHC gene: a 545C-A transversion resulting in a thr182-to-asn (T182N) substitution, and a 746A-G transition resulting in a tyr249-to-cys (Y249C; 611935.0003) substitution. Neither mutation was identified in 100 ethnically matched control chromosomes. He was diagnosed at age 3 months and showed hypotonia, nystagmus, dystonia, seizures, and megaloblastic anemia.


.0003   HOMOCYSTINURIA, cblD TYPE, VARIANT 1

MMADHC, TYR249CYS
SNP: rs118204046, gnomAD: rs118204046, ClinVar: RCV000000799, RCV001378885, RCV001844002, RCV002251849

For discussion of the tyr249-to-cys (Y249C) mutation in the MMADHC gene that was found in compound heterozygous state in a patient with homocystinuria type cblD (see 277410) by Coelho et al. (2008), see 611935.0002.


.0004   METHYLMALONIC ACIDURIA, cblD TYPE, VARIANT 2

MMADHC, 8-BP DEL, NT57
SNP: rs397509361, ClinVar: RCV000000800, RCV000203371

In an Indian boy with methylmalonic aciduria complementation group cblD (see 277410), Coelho et al. (2008) identified a homozygous 8-bp deletion (57delCTCTTTAG) in the MMADHC gene, resulting in a frameshift and premature termination at codon 20. The patient was previously reported by Suormala et al. (2004). He was born prematurely at 32 weeks' gestation and showed severe respiratory distress syndrome, necrotizing enterocolitis, and seizures.


.0005   METHYLMALONIC ACIDURIA, cblD TYPE, VARIANT 2

MMADHC, ARG54TER
SNP: rs118204047, gnomAD: rs118204047, ClinVar: RCV000000801, RCV000203332

In a Haitian boy with methylmalonic aciduria type cblD (see 277410), Coelho et al. (2008) identified compound heterozygosity for 2 mutations in the MMADHC gene: a 160C-T transition resulting in an arg54-to-ter (R54X) substitution, and an 18-bp duplication (611935.0006) resulting in duplication of residues 103 to 108. He was diagnosed at age 11 months, and had severe ketotic coma, dehydration, hyperammonemia, leukopenia, and thrombocytopenia.


.0006   METHYLMALONIC ACIDURIA, cblD TYPE, VARIANT 2

MMADHC, 18-BP DUP, NT307
SNP: rs397509362, ClinVar: RCV000000802, RCV000203341

For discussion of the 18-bp duplication in the MMADHC gene that was found in compound heterozygous state in a patient with methylmalonic aciduria type cblD (see 277410) by Coelho et al. (2008), see 611935.0005.


.0007   METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA, cblD TYPE

MMADHC, ARG250TER
SNP: rs118204048, gnomAD: rs118204048, ClinVar: RCV000000803, RCV001818114

In a Spanish American boy with combined methylmalonic aciduria and homocystinuria complementation group cblD (MAHCD; 277410) originally reported by Goodman et al. (1970), Coelho et al. (2008) identified a homozygous 748C-T transition in the MMADHC gene, resulting in an arg250-to-ter (R250X) substitution. The boy was born of consanguineous parents and had an acute psychotic episode, marfanoid appearance, nystagmus, mild mental retardation, and increased mean corpuscular volume.


.0008   METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA, cblD TYPE

MMADHC, 1-BP DUP, 419A
SNP: rs397509363, gnomAD: rs397509363, ClinVar: RCV000000804

In a Scandinavian girl with combined methylmalonic aciduria and homocystinuria complementation group cblD (MAHCD; 277410), Coelho et al. (2008) identified a homozygous 1-bp duplication (419dupA) in the MMADHC gene, resulting in a tyr140-to-ter (Y140X) substitution. She presented in early infancy with developmental delay, seizures, and megaloblastic anemia.


.0009   METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA, cblD TYPE

MMADHC, IVS7DS, 4-BP DEL
SNP: rs397509364, ClinVar: RCV000000805

In an Italian boy with combined methylmalonic aciduria and homocystinuria complementation group cblD (MAHCD; 277410), born of consanguineous parents, Coelho et al. (2008) identified a homozygous 4-bp deletion (696+1delGTGA) in intron 7 of the MMADHC gene, resulting in the skipping of exon 7. The patient was diagnosed at age 22 days and showed poor feeding, encephalopathy, seizures, and increased mean corpuscular volume.


REFERENCES

  1. Coelho, D., Suormala, T., Stucki, M., Lerner-Ellis, J. P., Rosenblatt, D. S., Newbold, R. F., Baumgartner, M. R., Fowler, B. Gene identification for the cblD defect of vitamin B12 metabolism. New Eng. J. Med. 358: 1454-1464, 2008. [PubMed: 18385497] [Full Text: https://doi.org/10.1056/NEJMoa072200]

  2. Cooper, B. A., Rosenblatt, D. S., Watkins, D. Methylmalonic aciduria due to a new defect in adenosylcobalamin accumulation by cells. Am. J. Hemat. 34: 115-120, 1990. [PubMed: 2339678] [Full Text: https://doi.org/10.1002/ajh.2830340207]

  3. Goodman, S. I., Moe, P. G., Hammond, K. B., Mudd, S. H., Uhlendorf, B. W. Homocystinuria with methylmalonic aciduria: two cases in a sibship. Biochem. Med. 4: 500-515, 1970. [PubMed: 5524089] [Full Text: https://doi.org/10.1016/0006-2944(70)90080-3]

  4. Stucki, M., Coelho, D., Suormala, T., Burda, P., Fowler, B., Baumgartner, M. R. Molecular mechanisms leading to three different phenotypes in the cblD defect of intracellular cobalamin metabolism. Hum. Molec. Genet. 21: 1410-1418, 2012. [PubMed: 22156578] [Full Text: https://doi.org/10.1093/hmg/ddr579]

  5. Suormala, T., Baumgartner, M. R., Coelho, D., Zavadakova, P., Kozich, V., Koch, H. G., Berghauser, M., Wraith, J. E., Burlina, A., Sewell, A., Herwig, J., Fowler, B. The cblD defect causes either isolated or combined deficiency of methylcobalamin and adenosylcobalamin synthesis. J. Biol. Chem. 279: 42742-42749, 2004. [PubMed: 15292234] [Full Text: https://doi.org/10.1074/jbc.M407733200]


Contributors:
Cassandra L. Kniffin - updated : 6/24/2013
Cassandra L. Kniffin - updated : 4/7/2008

Creation Date:
Patricia A. Hartz : 4/4/2008

Edit History:
carol : 03/10/2021
carol : 01/12/2018
mcolton : 06/15/2015
carol : 9/12/2013
joanna : 8/5/2013
carol : 7/1/2013
ckniffin : 6/24/2013
carol : 1/29/2009
wwang : 4/7/2008
ckniffin : 4/7/2008
mgross : 4/4/2008