U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    wnt3 wingless-type MMTV integration site family, member 3 [ Ciona intestinalis (vase tunicate) ]

    Gene ID: 445715, updated on 21-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    wnt3
    Gene description
    wingless-type MMTV integration site family, member 3
    See related
    Ensembl:ENSCING00000009599
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ciona intestinalis
    Lineage
    Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
    Also known as
    Ci-Wnt3
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See wnt3 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    104 current KH (GCF_000224145.3) 9 NC_020174.2 (5275578..5281983)

    Chromosome 9 - NC_020174.2Genomic Context describing neighboring genes Neighboring gene transmembrane protein 237 Neighboring gene gap junction gamma-2 protein-like Neighboring gene uncharacterized LOC100178707 Neighboring gene Golgi SNAP receptor complex member 2 Neighboring gene ubiquitin domain-containing protein UBFD1-like Neighboring gene leucine-rich repeat-containing protein 49

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_020174.2 Chromosome 9 Reference KH Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Gene expression profiles of transcription factors and signaling molecules in the ascidian embryo: towards a comprehensive understanding of gene networks. Imai KS, et al. Development, 2004 Aug. PMID 15269171
    2. Genomewide surveys of developmentally relevant genes in Ciona intestinalis. Satou Y, et al. Dev Genes Evol, 2003 Jun. PMID 12736827

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables frizzled binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell fate commitment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    wingless-type MMTV integration site family, member 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001128859.1 → NP_001122331.1  wingless-type MMTV integration site family, member 3

      See identical proteins and their annotated locations for NP_001122331.1

      Status: PROVISIONAL

      Source sequence(s)
      AB210747
      UniProtKB/TrEMBL
      A0A1W2VPC4, F6RH05, Q4H2M5
      Related
      ENSCINP00000023949, ENSCINT00000024195
      Conserved Domains (1) summary
      pfam00110
      Location:1 → 303
      wnt; wnt family

    RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference KH Primary Assembly

    Genomic

    1. NC_020174.2 Reference KH Primary Assembly

      Range
      5275578..5281983
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009861373.3 → XP_009859675.1  wingless-type MMTV integration site family, member 3 isoform X1

      UniProtKB/TrEMBL
      A0A1W3JR48
      Conserved Domains (1) summary
      pfam00110
      Location:78 → 392
      wnt; wnt family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Miscellaneous