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    LOC101929248 uncharacterized LOC101929248 [ Homo sapiens (human) ]

    Gene ID: 101929248, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC101929248
    Gene description
    uncharacterized LOC101929248
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC101929248 in Genome Data Viewer
    Location:
    8p23.1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (10850645..10858107)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (8882469..8888595, complement)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene PIN2 (TERF1) interacting telomerase inhibitor 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:10697101-10697601 Neighboring gene microRNA 1322 Neighboring gene uncharacterized LOC112268022 Neighboring gene PINX1 divergent transcript Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26997 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:10785877-10786571 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:10795001-10795652 Neighboring gene XK related 6 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:10818763-10819262 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:10828786-10829181 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:10833945-10834446 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:10865365-10866070 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18917 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18918 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18919 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18920 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:10917857-10918374 Neighboring gene uncharacterized LOC101929269 Neighboring gene microRNA 598

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      10850645..10858107
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_002956693.2 RNA Sequence

    2. XR_002956689.2 RNA Sequence

    3. XR_007060823.1 RNA Sequence

    4. XR_007060822.1 RNA Sequence

    5. XR_002956691.2 RNA Sequence

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_018654717.1 Reference GRCh38.p14 PATCHES

      Range
      2487282..2496765 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001745808.3 RNA Sequence

    2. XR_002959192.2 RNA Sequence

    3. XR_007069083.1 RNA Sequence

    4. XR_002959191.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      8882469..8888595 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007078685.1 RNA Sequence

    2. XR_007078684.1 RNA Sequence

    3. XR_007078683.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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