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    SNORA2A small nucleolar RNA, H/ACA box 2A [ Homo sapiens (human) ]

    Gene ID: 677793, updated on 10-Oct-2023

    Summary

    Official Symbol
    SNORA2Aprovided by HGNC
    Official Full Name
    small nucleolar RNA, H/ACA box 2Aprovided by HGNC
    Primary source
    HGNC:HGNC:32584
    See related
    Ensembl:ENSG00000206612 AllianceGenome:HGNC:32584
    Gene type
    snoRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ACA2A
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    Genomic context

    See SNORA2A in Genome Data Viewer
    Location:
    12q13.11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (48656648..48656782, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (48618671..48618805, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (49050431..49050565, complement)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902928 Neighboring gene KAT8 regulatory NSL complex subunit 2 Neighboring gene small nucleolar RNA, H/ACA box 2C Neighboring gene microRNA 1291 Neighboring gene small nucleolar RNA, H/ACA box 2B Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6285 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4409 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4410 Neighboring gene cyclin T1 Neighboring gene MPRA-validated peak1722 silencer Neighboring gene MPRA-validated peak1723 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6286

    Genomic regions, transcripts, and products

    Phenotypes

    EBI GWAS Catalog

    Description
    Clozapine-induced agranulocytosis is associated with rare HLA-DQB1 and HLA-B alleles.
    EBI GWAS Catalog

    General gene information

    Other Names

    • ACA2a snoRNA

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002950.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AJ609426
      Related
      ENST00000383885.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      48656648..48656782 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      48618671..48618805 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)