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    LOC100419366 phosphodiesterase 8B pseudogene [ Homo sapiens (human) ]

    Gene ID: 100419366, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC100419366
    Gene description
    phosphodiesterase 8B pseudogene
    See related
    Ensembl:ENSG00000259743
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    Location:
    15q21.1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (46099203..46100374, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (43906953..43908124, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (46391401..46392572, complement)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370802 Neighboring gene small nucleolar RNA SNORD71 Neighboring gene Sharpr-MPRA regulatory region 13517 Neighboring gene NANOG hESC enhancer GRCh37_chr15:46113505-46114048 Neighboring gene uncharacterized LOC107984794 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr15:46211759-46212958 Neighboring gene NANOG hESC enhancer GRCh37_chr15:46240311-46241057 Neighboring gene Sharpr-MPRA regulatory region 1940 Neighboring gene Sharpr-MPRA regulatory region 14673 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:46397095-46397595 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:46437799-46438300 Neighboring gene small nucleolar RNA SNORD11 Neighboring gene MT-ND5 pseudogene 40

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_025309.1 

      Range
      101..1272
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      46099203..46100374 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      43906953..43908124 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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