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    YTHDF1P1 YTH domain family member 1 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 402220, updated on 10-Oct-2023

    Summary

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    Official Symbol
    YTHDF1P1provided by HGNC
    Official Full Name
    YTH domain family member 1 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:31681
    See related
    Ensembl:ENSG00000251389 AllianceGenome:HGNC:31681
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    YTHDF1P
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    Genomic context

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    Location:
    5q15
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (97368587..97370619)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (97869619..97871651)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (96704291..96706323)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene LIX1 and RIOK2 antisense RNA 1 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr5:96459480-96460679 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22830 Neighboring gene limb and CNS expressed 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16202 Neighboring gene RNA, U1 small nuclear 73, pseudogene Neighboring gene RIO kinase 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22833 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22832 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22831 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:96669582-96669797 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr5:96724001-96725200 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:96735958-96736798 Neighboring gene SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5) pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chr5:96844479-96845210 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:96855347-96855880 Neighboring gene long intergenic non-protein coding RNA 1340 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22834

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • YTH domain family 1 pseudogene
    • YTH domain family, member 1 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_004396.5 

      Range
      101..2133
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      97368587..97370619
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      97869619..97871651
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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