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    RABEPKP1 Rab9 effector protein with kelch motifs pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 100421226, updated on 10-Oct-2023

    Summary

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    Official Symbol
    RABEPKP1provided by HGNC
    Official Full Name
    Rab9 effector protein with kelch motifs pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:39791
    See related
    Ensembl:ENSG00000225801 AllianceGenome:HGNC:39791
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    Location:
    13q21.33
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (71296225..71297232)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (70521417..70522424)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (71870357..71871364)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene VISTA enhancer hs882 Neighboring gene MTCL1 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7809 Neighboring gene NANOG hESC enhancer GRCh37_chr13:71604884-71605484 Neighboring gene long intergenic non-protein coding RNA 348 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:71629802-71630358 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5393 Neighboring gene VISTA enhancer hs129 Neighboring gene ReSE screen-validated silencer GRCh37_chr13:71853958-71854155 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7810 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:71964457-71964957 Neighboring gene dachshund family transcription factor 1 Neighboring gene Sharpr-MPRA regulatory region 6884 Neighboring gene ribosomal protein L21 pseudogene 109 Neighboring gene H3 histone pseudogene 36

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_024937.1 

      Range
      101..1108
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      71296225..71297232
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      70521417..70522424
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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