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ABHD17AP1 ABHD17A pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 728917, updated on 10-Oct-2023

Summary

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Official Symbol
ABHD17AP1provided by HGNC
Official Full Name
ABHD17A pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:28394
See related
AllianceGenome:HGNC:28394
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C1orf47; FAM108A2; FAM108A3; ABHD17AP2; FAM108A3P; FAM108A11P
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Genomic context

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See ABHD17AP1 in Genome Data Viewer
Location:
1q21.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (148146066..148149788)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (146657625..146661347, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (147618345..147622067)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene PDE4DIP pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:147532116-147532616 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:147532617-147533117 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:146009957-146010457 Neighboring gene NBPF member 11 Neighboring gene profilin 1 pseudogene 4 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1637 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1638 Neighboring gene uncharacterized LOC105371227 Neighboring gene long intergenic non-protein coding RNA 2805

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The DNA sequence and biological annotation of human chromosome 1. Gregory SG, et al. Nature, 2006 May 18. PMID 16710414

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • abhydrolase domain containing 17A pseudogene 1
  • abhydrolase domain containing 17A pseudogene 2
  • abhydrolase domain-containing protein FAM108A2
  • family with sequence similarity 108, member A11, pseudogene
  • family with sequence similarity 108, member A2
  • family with sequence similarity 108, member A3, pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011738.1 

    Range
    101..3823
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    148146066..148149788
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    146657625..146661347 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001080422.1: Suppressed sequence

    Description
    NM_001080422.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
Nucleotide Protein
Heading Accession and Version

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