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TRQ-TTG1-1 tRNA-Gln (anticodon TTG) 1-1 [ Homo sapiens (human) ]

Gene ID: 7229, updated on 10-Oct-2023

Summary

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Official Symbol
TRQ-TTG1-1provided by HGNC
Official Full Name
tRNA-Gln (anticodon TTG) 1-1provided by HGNC
Primary source
HGNC:HGNC:12342
See related
MIM:189923; AllianceGenome:HGNC:12342
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRQ2; TRNAQ2
Summary
Mammalian cells contain at least 2 species of glutamine tRNA, the Gln(CUG) form (TRQ1; MIM 189919) and the Gln(UUG) form. Nemoto et al. (1991) [PubMed 2041751] reported the nucleotide sequence of the human tRNA(Gln/UUG) gene. In a correction, Nemoto et al. (1991) [PubMed 2041751] stated that the gene involved should have been designated tRNA-GLN/U*UG, where U* is a derivative of U.[supplied by OMIM, Sep 2009]
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Genomic context

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See TRQ-TTG1-1 in Genome Data Viewer
Location:
17q21.32
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (49192528..49192599)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (50055617..50055688)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (47269890..47269961)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904021 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:47202514-47203019 Neighboring gene beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group) Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:47226398-47227388 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:47227389-47228379 Neighboring gene ribosomal protein S10 pseudogene 25 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:47260706-47261206 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12349 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12350 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12351 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:47275189-47275688 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12352 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:47287312-47287988 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12354 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12355 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12356 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12357 Neighboring gene G protein subunit gamma transducin 2 Neighboring gene ABI family member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nucleotide sequence of the human tRNA(UUGGln) gene. Nemoto F, et al. Nucleic Acids Res, 1991 May 25. PMID 2041751, Free PMC Article
  2. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA glutamine 2
  • tRNA-Gln-TTG-1-1
  • transfer RNA glutamine 2 (anticodon UUG)
  • transfer RNA-Gln (TTG) 1-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    49192528..49192599
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    50055617..50055688
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
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