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TRL-TAG1-1 tRNA-Leu (anticodon TAG) 1-1 [ Homo sapiens (human) ]

Gene ID: 7208, updated on 10-Oct-2023

Summary

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Official Symbol
TRL-TAG1-1provided by HGNC
Official Full Name
tRNA-Leu (anticodon TAG) 1-1provided by HGNC
Primary source
HGNC:HGNC:12316
See related
MIM:189920; AllianceGenome:HGNC:12316
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRL2; TRNAL2
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Genomic context

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Location:
17p13.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (8120314..8120395, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (8025689..8025770, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (8023632..8023713, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene tRNA-Lys (anticodon TTT) 3-5 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8152 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8153 Neighboring gene tRNA-Gln (anticodon CTG) 1-5 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8154 Neighboring gene tRNA-Arg (anticodon TCT) 2-1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8155 Neighboring gene hes family bHLH transcription factor 7 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8156 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:8027282-8027802 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8157 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:8029079-8029880 Neighboring gene tRNA-Gly (anticodon GCC) 2-6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Defining the importance of mitochondrial gene defects in maternally inherited diabetes by sequencing the entire mitochondrial genome. Choo-Kang AT, et al. Diabetes, 2002 Jul. PMID 12086967
  2. The nucleotide sequence of a human tRNALeu gene. McLaren A, et al. Nucleic Acids Res, 1986 Jul 25. PMID 3637777, Free PMC Article
  3. Nucleotide sequence of a segment of human DNA containing the three tRNA genes. Roy KL, et al. Nucleic Acids Res, 1982 Nov 25. PMID 6296772, Free PMC Article
  4. Chromosomal assignment of a large tRNA gene cluster (tRNA(Leu), tRNA(Gln), tRNA(Lys), tRNA(Arg), tRNA(Gly)) to 17p13.1. Morrison N, et al. Hum Genet, 1991 Jun. PMID 2066114
  5. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Observational study of gene-disease association. (HuGE Navigator)
    Title: Defining the importance of mitochondrial gene defects in maternally inherited diabetes by sequencing the entire mitochondrial genome.
Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • tRNA leucine 2 (anticodon UAG)
  • tRNA-Leu (TAG) 1-1
  • transfer RNA leucine 2 (anticodon UAG)
  • transfer RNA-Leu (TAG) 1-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    8120314..8120395 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    8025689..8025770 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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