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SNORA79 small nucleolar RNA, H/ACA box 79 [ Homo sapiens (human) ]

Gene ID: 677845, updated on 10-Oct-2023

Summary

Official Symbol
SNORA79provided by HGNC
Official Full Name
small nucleolar RNA, H/ACA box 79provided by HGNC
Primary source
HGNC:HGNC:32665
See related
Ensembl:ENSG00000221303 AllianceGenome:HGNC:32665
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ACA65; SNORA79A
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Genomic context

Location:
14q31.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (81202695..81202834, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (75414919..75415058, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (81669039..81669178, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene thyroid stimulating hormone receptor Neighboring gene uncharacterized LOC101928462 Neighboring gene ReSE screen-validated silencer GRCh37_chr14:81507651-81507772 Neighboring gene NMNAT1 pseudogene 1 Neighboring gene uncharacterized LOC105370594 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8823 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8824 Neighboring gene general transcription factor IIA subunit 1 Neighboring gene GTF2A1 intron CAGE-defined high expression enhancer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5984 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5985 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5986 Neighboring gene GTF2A1 antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8827 Neighboring gene dynein light chain LC8-type 1 pseudogene 1

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003021.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010582
    Related
    ENST00000408376.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    81202695..81202834 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    75414919..75415058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)