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RPL21P98 ribosomal protein L21 pseudogene 98 [ Homo sapiens (human) ]

Gene ID: 653079, updated on 10-Oct-2023

Summary

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Official Symbol
RPL21P98provided by HGNC
Official Full Name
ribosomal protein L21 pseudogene 98provided by HGNC
Primary source
HGNC:HGNC:36397
See related
Ensembl:ENSG00000243071 AllianceGenome:HGNC:36397
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL21_47_1259
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Genomic context

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See RPL21P98 in Genome Data Viewer
Location:
12q21.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (76660365..76660928)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (76638313..76638875)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (77054145..77054708)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105369850 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr12:77001658-77002857 Neighboring gene ribosomal protein L7a pseudogene 9 Neighboring gene Sharpr-MPRA regulatory region 7057 Neighboring gene YWHAQ pseudogene 7 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:77027852-77028505 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:77028506-77029158 Neighboring gene uncharacterized LOC105369851 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr12:77029947-77031146 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:77070229-77070729 Neighboring gene ribosomal protein L7 pseudogene 43 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:77132707-77133208 Neighboring gene RWD domain containing 1 pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009659.2 

    Range
    101..664
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    76660365..76660928
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    76638313..76638875
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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